Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1036 a.a., PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  179 bits (454), Expect = 5e-49
 Identities = 172/576 (29%), Positives = 265/576 (46%), Gaps = 55/576 (9%)

Query: 43  LFDDLPVGVFRSTLDGEHLLYANTSLAHLFGWPDAGAMIEGQTPRDLYAS-PTAR-DDIL 100
           LFDD PV ++    +    L  N++    +G+ +A  +    T R +  +   AR +  L
Sbjct: 230 LFDDHPVPMYIFDRETLRFLAVNSAAIQQYGYSEAEFL--DMTIRAIRPNVEIARLESHL 287

Query: 101 QRLQ--QAGEMTTDVIHLQRPGHAQRACILHLRIDNAMKTIEGWVM--DVTELDHRKEGL 156
           QR    Q G     + H +R   +  +  +     N M     +V+  DVTE  + +   
Sbjct: 288 QRADSVQHGRTMAGIWHHRRKDGSTISADISYHALNFMGRAAFFVLADDVTEQINAEAEA 347

Query: 157 RDAHRFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLT-PENLQGKNADDIAPPDLA 215
           + +++ L+ V+D +P  +F+KD+   Y   N AF+   GL+ PE + GK+  D+     A
Sbjct: 348 QRSNQMLEAVIDNIPQRIFWKDLESRYLGCNMAFARDGGLSYPEQVVGKSDADMPWRAFA 407

Query: 216 AVYHSMDQALLDAKGPASQRYESAFTTPHGLRHVLFDKATVVDDEGTARGLVGIITDITG 275
            +  + D+ ++D  G     +E         R  +  K    D EG   G++G  TDIT 
Sbjct: 408 ELLSAHDKEVIDT-GVPKMNFEVDMVIDGVHRTTVTSKLPFTDGEGRVIGVLGSYTDITE 466

Query: 276 RKQAEDALR----RVEARIRALVHNASDGFFSVTPEGYITES-NPAMCKLLGLKVAPSSG 330
           RK+A+ ALR     ++A + A++  A       +P G + E  NPA  ++ G   A   G
Sbjct: 467 RKRADLALRLQSRALDASVNAILITAP------SPSGNLIEYVNPAFMRITGYDPAEVIG 520

Query: 331 ERGELTCVAPDDDESSDANRAQNILNLPDMFAEGREAWDAALHRLGTGAPPAPFEVRVRR 390
              +   +  DD E       + + ++    A  RE                   VR  R
Sbjct: 521 H--DCRVLQRDDREQ------EGVASIRKALAANREVSAV---------------VRNYR 557

Query: 391 DDGQTVWLSLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTGLFNR 450
            DG   W  L + PV   P  +G      G+ +D+T     +  L  +   D LT L NR
Sbjct: 558 KDGALFWNQLFIAPV---PNAEGVITHHIGVINDVTDLMRYQEQLEYQANYDSLTRLPNR 614

Query: 451 AHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRRRLRH 510
             + D L   L  A    + + ++F+DLDGFK VND+ GH+VGD LL  VA RL R  R 
Sbjct: 615 NLLRDRLQHALIVAQRQHKGVAVVFMDLDGFKNVNDSLGHSVGDRLLGVVAERLARCTRT 674

Query: 511 TDIAIRLGGDEFAVLLWDVAGKEA----VERIGAGILSIMAPAFTCTDIPCSVSASIGAS 566
           +D   R GGDEF +++ D   +++    +ER+ A   SI  P +        V  S+GAS
Sbjct: 675 SDTVARHGGDEFVIVMTDTVDEQSLIAWMERVRA---SISEPVW-LDGTELYVGCSMGAS 730

Query: 567 LYPQHADDAPSLLRLADEAMYRAKAEGKNRMAFAGP 602
           L+PQ  DDA +L++ AD AMYRAK  G+N   F  P
Sbjct: 731 LFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQP 766