Pairwise Alignments

Query, 256 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 254 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase from Pseudomonas stutzeri RCH2

 Score =  122 bits (306), Expect = 7e-33
 Identities = 85/250 (34%), Positives = 119/250 (47%), Gaps = 15/250 (6%)

Query: 6   IIPARMGSSRFPGKPMADIHGVPMVGHVTFRTAMSKCLTETYVATCDKEIYDYAESVGLK 65
           +IPAR  S+R PGKP+ DI G PM+ HV +  A         VAT D  I +   + G +
Sbjct: 8   VIPARYASTRLPGKPLQDIAGKPMIRHV-WEQASKSGAQRVVVATDDSRIVEACSAFGAQ 66

Query: 66  AVMTGDHHVRCTTRTAEAMLKIEEATGRKAD-IVVMVQGDEPMVTPDMIDAAIEPMLKDP 124
            V+T   H   T R AE    + E  G   D IVV VQGDEP++ P +ID     +   P
Sbjct: 67  VVLTRADHNSGTDRLAE----VAEQLGLPGDAIVVNVQGDEPLIPPAVIDQVAANLAAHP 122

Query: 125 SINVVNLMAEMETVAEFEDPNEVKVVVDFNNDALYFSREPVP--------SRKKGVTEVP 176
              +  L   +       +PN VKV+ D +  AL FSR P+P         R +    VP
Sbjct: 123 EAAIATLAEPLTDAQALFNPNVVKVLSDVDGLALTFSRAPLPWARDSFAADRSQLPEGVP 182

Query: 177 MRKQVCIIPFRRDYLLKFNEMQESPLEIIESVDMMRILEHGEKVRMVPT-DKRTLSVDTA 235
            R+ + I  +R  +L  F       LE  E ++ +R L HG ++ +    +     VDTA
Sbjct: 183 YRRHIGIYAYRASFLADFVSWGPCWLEDTECLEQLRALWHGRRIHVADAIEAPPAGVDTA 242

Query: 236 EDLARVIEMM 245
           EDL RV  ++
Sbjct: 243 EDLERVRRLL 252