Pairwise Alignments

Query, 256 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 254 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase from Pseudomonas syringae pv. syringae B728a

 Score =  127 bits (318), Expect = 3e-34
 Identities = 88/250 (35%), Positives = 125/250 (50%), Gaps = 15/250 (6%)

Query: 6   IIPARMGSSRFPGKPMADIHGVPMVGHVTFRTAMSKCLTETYVATCDKEIYDYAESVGLK 65
           +IPAR GSSRFPGKP+  I G PMV  + +  A         +AT D  I +  ++ G +
Sbjct: 8   VIPARYGSSRFPGKPLKTIAGKPMV-QLVWEQACKSSAERVVIATDDARIVEACQAFGAE 66

Query: 66  AVMTGDHHVRCTTRTAEAMLKIEEATGRKAD-IVVMVQGDEPMVTPDMIDAAIEPMLKDP 124
            ++T D H   T R AE   ++    G  AD IVV VQGDEPM+ P +ID     +   P
Sbjct: 67  VLLTRDDHNSGTDRLAEVAAQL----GLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHP 122

Query: 125 SINVVNLMAEMETVAEFEDPNEVKVVVDFNNDALYFSREPVP--------SRKKGVTEVP 176
              +  L   ++ VA   +PN VKV  D N  AL FSR P+P        +R +    VP
Sbjct: 123 EAGMSTLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDQLPAGVP 182

Query: 177 MRKQVCIIPFRRDYLLKFNEMQESPLEIIESVDMMRILEHGEKVRMVPT-DKRTLSVDTA 235
            R+ + I  +R  +L  F       LE  ES++ +R L +G ++ +    +     VDT 
Sbjct: 183 YRRHIGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTP 242

Query: 236 EDLARVIEMM 245
           EDL RV  ++
Sbjct: 243 EDLERVRRLL 252