Pairwise Alignments

Query, 256 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 266 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (315), Expect = 7e-34
 Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 13/242 (5%)

Query: 4   IAIIPARMGSSRFPGKPMADIHGVPMVGHVTFRTAMSKCLTETYVATCDKEIYDYAESVG 63
           I +IPARM S+R PGKP+ADIHGVPM+  V +R AM   +    VA  + EI     + G
Sbjct: 27  IVVIPARMASTRLPGKPLADIHGVPMIVQV-WRRAMEAGIGPVLVAAAEDEIAQAVRAAG 85

Query: 64  LKAVMTGDHHVRCTTRTAEAMLKIEEATGRKADIVVMVQGDEPMVTPDMIDAAIEPMLKD 123
             AV+T       + R  +A+ + + A GR A +VV VQGD P + P +I  A+E +L +
Sbjct: 86  GNAVLTDPDLPSGSDRVWQAVERFDPA-GRHA-VVVNVQGDLPTLDPGLIIRAVETVLAE 143

Query: 124 PSINVVNLMAEMETVAEFEDPNEVKVVVDF-----NNDALYFSREPVPSRKKGVTEVPMR 178
           P I +  L+ E+    E  +PN VK VV          ALYFSR  VP         P  
Sbjct: 144 PDIALSTLICEITREEERTNPNVVKAVVGLAEGQTRGRALYFSRATVPHGPG-----PHY 198

Query: 179 KQVCIIPFRRDYLLKFNEMQESPLEIIESVDMMRILEHGEKVRMVPTDKRTLSVDTAEDL 238
             + +  +RR  L  F  +    LE  E ++ +R LE+  ++     D   L VDTAEDL
Sbjct: 199 HHIGLYAYRRTTLGAFVSLPPGVLERREKLEQLRALENHMRIEAALVDTVPLGVDTAEDL 258

Query: 239 AR 240
            R
Sbjct: 259 ER 260