Pairwise Alignments

Query, 256 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 262 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  140 bits (353), Expect = 3e-38
 Identities = 84/249 (33%), Positives = 135/249 (54%), Gaps = 11/249 (4%)

Query: 3   IIAIIPARMGSSRFPGKPMADIHGVPMVGHVTFRTAMSKCLTETYVATCDKEIYDYAESV 62
           II IIPAR  S+RFPGKP+ DI G  M+  V  + + +K L++  +AT D+ I D  +  
Sbjct: 15  IIGIIPARYASTRFPGKPLVDIAGKSMIQRVYEQASKAKSLSKVVIATDDERIADEVKRF 74

Query: 63  GLKAVMTGDHHVRCTTRTAEAMLKIEEATGRKADIVVMVQGDEPMVTPDMIDAAIEPMLK 122
           G + + T   H   T R AE    IE   G   DIV+ +QGDEP + P  I+  +     
Sbjct: 75  GGEFIFTSSDHQSGTDRCAEV---IETLPG--YDIVINIQGDEPFIEPAQIE-LLASCFT 128

Query: 123 DPSINVVNLMAEMETVAEFEDPNEVKVVVDFNNDALYFSREPVPSRKKGVTEV-----PM 177
           +  + +  L+  +++     +PN  KVV+D N  A+YFSR P+P  + G   V       
Sbjct: 129 EEKVQLATLIKSIQSQESVYNPNSPKVVIDVNGRAMYFSRSPIPFIRNGEPGVWAEKHQF 188

Query: 178 RKQVCIIPFRRDYLLKFNEMQESPLEIIESVDMMRILEHGEKVRMVPTDKRTLSVDTAED 237
            K + I  +R + L    ++  S LEI ES++ +R +E+G  ++   TD  T+++DT ED
Sbjct: 189 YKHIGIYGYRTESLKAITKLPPSSLEIAESLEQLRWIENGFYIQTKVTDLETVAIDTPED 248

Query: 238 LARVIEMMR 246
           L ++ ++++
Sbjct: 249 LLKLNKLLK 257