Pairwise Alignments

Query, 256 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 245 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  147 bits (371), Expect = 2e-40
 Identities = 87/239 (36%), Positives = 135/239 (56%), Gaps = 5/239 (2%)

Query: 1   MNIIAIIPARMGSSRFPGKPMADIHGVPMVGHVTFRTAMSKCLTETYVATCDKEIYDYAE 60
           MN+  +IPAR GSSRFPGKP+A I+G PM+ HV  R A++K LT  YVAT D  I +  E
Sbjct: 1   MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLTAIYVATDDLRIKEAVE 60

Query: 61  SVGLKAVMTGDHHVRCTTRTAEAMLKIEEATGRKADIVVMVQGDEPMVTPDMIDAAIEPM 120
           + G K VMT  +    T R  +A+ ++  A     D+V+ +QGD+P++ P  I+  I   
Sbjct: 61  AFGGKVVMTDANAASGTDRIEDAITQLGLADD---DLVINLQGDQPLIDPISIEQIITLF 117

Query: 121 LKDP-SINVVNLMAEMETVAEFEDPNEVKVVVDFNNDALYFSREPVPSRKKGVTEVPMRK 179
            + P    +  L  E+    E  DP  VK+V D   +ALYFSR  +P   +   + P+ K
Sbjct: 118 ERHPGEFGMATLGYEITEEHELNDPKHVKMVFDNQFNALYFSRARIPF-GRDTDDYPVYK 176

Query: 180 QVCIIPFRRDYLLKFNEMQESPLEIIESVDMMRILEHGEKVRMVPTDKRTLSVDTAEDL 238
            + +  + R+++  FN++    LE +E ++ +R LEHG  +++  +   +  VDT ED+
Sbjct: 177 HLGVYAYTREFVRTFNKLPLGRLEDLEKLEQLRALEHGHTIKVAISAFDSPEVDTPEDI 235