Pairwise Alignments

Query, 538 a.a., flagellar M-ring protein FliF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 594 a.a., flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) from Pseudomonas stutzeri RCH2

 Score =  243 bits (619), Expect = 2e-68
 Identities = 178/567 (31%), Positives = 283/567 (49%), Gaps = 55/567 (9%)

Query: 17  SRISMSQRV-FIVGLALVTVGIFFTLILWINRPDYRVLYSNLAGEDANRVVKLLQANKVP 75
           S +SM ++V  +VGLA  +V I F ++LW  +PDYR L  +LAG DAN+V++ L A  + 
Sbjct: 31  SDMSMLRQVGLLVGLA-ASVAIGFAVVLWSQQPDYRPLLGSLAGMDANQVMETLAAADIA 89

Query: 76  YKLENDGGTVLVPADKLYDLRIKVAGEGNL-VGQGIGFEIFD-DLKVGQTDFVQKINYQR 133
           Y +E + G +LV A+ L   R+K+A  G       IGFEI D D  +G + F++   Y+R
Sbjct: 90  YTVEPNSGALLVKANDLARARLKLASAGIAPADSNIGFEILDKDQGLGTSQFMEATRYRR 149

Query: 134 ALQGELIRTISEFPGVETARVHLVIPHRSLFIEEQQKPSASVVVKLREGKKMEAQDVQAI 193
            L+GEL RTIS    V+ ARVHL IP  S+F+ +++KPSASV+V+L  G+ +E   V AI
Sbjct: 150 GLEGELGRTISSLNNVKGARVHLAIPKSSVFVRDERKPSASVLVELYPGRALEPSQVMAI 209

Query: 194 VNLVVMAVEGMDRNRVSVADTSGKILYYPTEDDSLQGLTTTQLEYKMRLQQNLERRIEEL 253
           +NLV  +V  +++++++V D  G +L    E   L  +   Q +Y  R++    +R+  +
Sbjct: 210 INLVATSVPELNKSQITVVDQKGNLLSDQQELTELS-MAGKQFDYSRRMESLYTQRVHNI 268

Query: 254 LYPVIGPGKVIAKVNADVDFSQRTIRRELYDPEKTVVRSEQRSEESTRG----------- 302
           L PV+G G+  A+V+ADVDFS      E ++P++  +RSEQ   E  +            
Sbjct: 269 LQPVLGSGRYKAEVSADVDFSAVESTSETFNPDQPALRSEQSVNEQRQSSLPPQGVPGAL 328

Query: 303 ------------RANLEA--------GAPDANFRGDGISGSASTQE-------GTRETRT 335
                       +AN  A        G P  +  G  I   A+ Q          RE  T
Sbjct: 329 SNQPPGPAAAPEQANQAAAAAGAVAPGQPLLDANGQQIMDPATGQPMLAPFPADKREQAT 388

Query: 336 TNFEINKEEQNIVANVGDLSRLSVAVIVDGTYEKAADGTYTFVPRNAEEMQRIRQLVSSA 395
            N+E+++         G L RLSVAV+VD      A G    VP  A+++ R  +LV  +
Sbjct: 389 RNYELDRSISYTKQQHGRLRRLSVAVVVDDQMTLNAAGEMVRVPWTADDLARFTRLVQDS 448

Query: 396 VGYDRARGDTVEVNSISFGGPDLPQE-ASLPQLFLDYALRLGKPLLNALLVFLFLLLVVR 454
           VG+D +RGD+V V + +F      +    +P     +   + K +L  L + + +  V+R
Sbjct: 449 VGFDASRGDSVSVINTAFVADSFGETFEEIPFYSQPWFWDVVKQVLGVLFILVLVFGVLR 508

Query: 455 PVVMALIRPKVEGEM--------IEGLEGLPAG--EERLALIEGDEEVDALDALRKIEDI 504
           PV+ +L  P    E+        +   EGL +G   +R++L  G + +         E  
Sbjct: 509 PVLKSLTNPSSGKELQVANGPGDLGDEEGLESGLSNDRVSL-SGPQNILLPSPSEGYEAQ 567

Query: 505 KAHAMQLAEQNMDQAVGIIRSWLKNDE 531
                 L   +  +   +++ W+  DE
Sbjct: 568 LNAIKNLVADDPGRVAQVVKEWINADE 594