Pairwise Alignments

Query, 538 a.a., flagellar M-ring protein FliF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 565 a.a., flagellar MS-ring protein (RefSeq) from Shewanella loihica PV-4

 Score =  179 bits (453), Expect = 3e-49
 Identities = 141/544 (25%), Positives = 257/544 (47%), Gaps = 41/544 (7%)

Query: 19  ISMSQRVFIVGLALVTVGIFFTLILWINRPDYRVLYSNLAGEDANRVVKLLQANKVPYKL 78
           + M +++ ++    + + +   ++LW   P+YR L   +  ++  +V+ +L  NKV Y++
Sbjct: 32  VDMLRQITMILALAICLALAVFVMLWAQEPEYRPL-GKMDTQEMVQVLDVLDKNKVNYQI 90

Query: 79  ENDGGTVLVPADKLYDLRIKVAGEGNLVGQGIGFEIFDDLKVGQTDFVQKINYQRALQGE 138
           + D   + VP D+  D+++ ++  G          +  D   G +  ++    + + +  
Sbjct: 91  DVD--VLKVPEDQYQDVKMMLSRAGIDNSPSRDDYLSKDSGFGVSQRMEAARLKNSQEQN 148

Query: 139 LIRTISEFPGVETARVHLVIPHRSLFIEEQQKPSASVVVKLREGKKMEAQDVQAIVNLVV 198
           L RTI E   V  A+V L IP  ++F   + KPSA+VVV  R G  +  ++V +IV++V 
Sbjct: 149 LARTIEELKSVSRAKVILAIPKENVFARNRSKPSATVVVNTRRG-GLGQEEVDSIVDIVA 207

Query: 199 MAVEGMDRNRVSVADTSGKILYYPTEDDSLQGLTTTQLEYKMRLQQNLERR--IEELLYP 256
            AV G++  RV+V D +G++L          G    + E ++  Q+  E R  IE +L P
Sbjct: 208 SAVHGLEPTRVTVTDANGRLL---NSGSQTAGSARARRELELVQQKEAEYRSKIESILMP 264

Query: 257 VIGPGKVIAKVNADVDFSQRTIRRELYDPEKTVVRSEQRSEESTRGRAN----------- 305
           ++GP    A+V+ ++DF+      + Y+P+   VRSE   E ++ G +            
Sbjct: 265 ILGPENFTAQVDVNMDFTSVEQTAKRYNPDLPAVRSEMTVENNSTGASTGGIAGALSNQP 324

Query: 306 -LEAGAPDANFRGDGISGSASTQEG-TRETRTTNFEINKEEQNIVANVGDLSRLSVAVIV 363
            +EA  P    +  G S    T  G + +  T N+E++    +    VG + R+SV+V V
Sbjct: 325 PMEANIPQ---QATGTSAQEQTLPGSSHKEATRNYELDTTISHTRQQVGVVRRVSVSVAV 381

Query: 364 D-GTYEKAADGTYTFVPRNAEEMQRIRQLVSSAVGYDRARGDTVEVNSISFGGPDLPQEA 422
           D  T     DG  T V R  +E+  IR+L+  AVG++  RGD +EV ++ F    + +  
Sbjct: 382 DFKTGPAGEDGQVTRVARTEQELSNIRRLLEGAVGFNTQRGDMIEVVTVPFMDQLVEEAP 441

Query: 423 SLPQLFLDYALRLGKPLLNALLVFLFLLLVVRPVVMALIRPKVE--------GEMIEGLE 474
           +L      +  R  K ++  L++ + +L VVRP++  LI P  +        G+ +  +E
Sbjct: 442 ALAIYEEPWFWRAIKLVMGGLIILVLILFVVRPMLKRLIYPDGQKMPDAPSLGDELAEIE 501

Query: 475 GLPAGEERLALIEGDEEVDALD-------ALRKIEDIKAHAMQLAEQNMDQAVGIIRSWL 527
              A +    L   D E    D        L K +D+      L     + +  +++ WL
Sbjct: 502 DQYAADTLGMLNRPDAEYSYADDGSILIPDLHKDDDMIKAIRALVANEPELSTQVVKGWL 561

Query: 528 KNDE 531
           + +E
Sbjct: 562 QENE 565