Pairwise Alignments

Query, 538 a.a., flagellar M-ring protein FliF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 565 a.a., flagellar basal-body MS-ring/collar protein FliF from Dyella japonica UNC79MFTsu3.2

 Score =  226 bits (576), Expect = 2e-63
 Identities = 171/554 (30%), Positives = 273/554 (49%), Gaps = 62/554 (11%)

Query: 23  QRVFIVGLALVTVGIFFTLILWINRPDYRVLYSNLAGEDANRVVKLLQANKVPYKLENDG 82
           Q + +V +A   V     ++LW   P+Y +LY+ L  +DA+ + + LQA+  PY+L  DG
Sbjct: 30  QLLLLVAVA-AAVAFGVAVVLWSRGPNYALLYAGLDSKDASAITQALQASNTPYQLGPDG 88

Query: 83  GTVLVPADKLYDLRIKVAGEGNLVGQ-GIGFEIFD-DLKVGQTDFVQKINYQRALQGELI 140
            ++ VPA  L  +R+++A +G   G  G    +   D   G +D  ++  YQ+ L+ +L 
Sbjct: 89  ASISVPAADLPAVRLRLAAQGLPQGSAGTSATVPGADSPFGMSDLAERTRYQQMLETDLG 148

Query: 141 RTISEFPGVETARVHLVIPHRSLFIEEQQKPSASVVVKLREGKKMEAQDVQAIVNLVVMA 200
            TI+    V  ARVHL +P  S FI + ++ SASV+V L  G++++A  V AIV+LV  +
Sbjct: 149 NTIAGLQSVRAARVHLALPKPSAFIRDNKQASASVLVTLFPGRQLDASQVAAIVHLVASS 208

Query: 201 VEGMDRNRVSVADTSGKILYYPTEDDSLQGLTTTQLEYKMRLQQNLERRIEELLYPVIGP 260
           V  +D  +VSV D  G++L   ++ D+   +  ++L    R++    +RIEELL P++GP
Sbjct: 209 VPELDPRQVSVVDQQGQLLTV-SDPDNPSAVGDSRLRLATRMENTYAQRIEELLTPLVGP 267

Query: 261 GKVIAKVNADVDFSQRTIRRELYDPEKTVVRSEQRSEESTR------------------- 301
           GKV A+V AD+DFSQ     E ++ +   +RSEQ S E  R                   
Sbjct: 268 GKVRAQVYADLDFSQTEKATETFNHDNPALRSEQVSSEQRRDGSSNGAVPGALSNQPPTT 327

Query: 302 -----------GRANLEAGAPDANFRGDGISGSASTQEGTRETRTTNFEINKEEQNIVAN 350
                      G AN  A A  AN    G S S++T+         N+E+++   ++   
Sbjct: 328 VAQPTAAKPNAGAANASANATTANANSGGESSSSATR---------NYELDRTVSHVSDP 378

Query: 351 VGDLSRLSVAVIVDGTYEKAADGTYTFVPRNAEEMQRIRQLVSSAVGYDRARGDTVEVNS 410
            G L+RL+VAV VD        G    VP  A+E++ +  L  +AVG+++ RGD+V V +
Sbjct: 379 AGRLARLTVAVAVDNKATTDDKGNNKSVPFTAQELEHLTDLAKNAVGFNQQRGDSVTVIN 438

Query: 411 ISF----GGPDLPQEASLPQLFLDYALRLGKPLLNALLVFLFLLLVVRPVVMALIRPKVE 466
             F    G   LP+     +  +   ++ G  +L AL++   LL   RP    L+R   +
Sbjct: 439 QPFHKAPGNEPLPETPFWQRPGVMDLIKQGGGVLVALIIAFGLL---RP----LLRGVFK 491

Query: 467 GEMIEGLEGLPAGEE-RLALIEGDEEVDALDALR-------KIEDIKAHAMQLAEQNMDQ 518
           G     L+ LPAG       +  D+  D +   R         E   A A ++  +N  Q
Sbjct: 492 GTPGTALQALPAGAGIPTVSVRIDDADDDMAPGRLGPPPGMNYEARVAMAKRMVTENPKQ 551

Query: 519 AVGIIRSWLKNDEG 532
              ++RSW+  D G
Sbjct: 552 VAQVVRSWVSEDGG 565