Pairwise Alignments

Query, 538 a.a., flagellar M-ring protein FliF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 273 a.a., type III secretion system inner membrane ring lipoprotein SctJ from Ralstonia sp. UNC404CL21Col

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 11/166 (6%)

Query: 53  LYSNLAGEDANRVVKLLQANKVPYKLE---NDGGTVLVP----ADKLYDLRIKVAGEGNL 105
           L SNL    AN V+  L    +  + E     G  VLV        L  LR +      L
Sbjct: 32  LVSNLGEPQANEVLSALSNAGIGARKEAVDEHGWQVLVDDSDMGQALDVLRAQGLPREPL 91

Query: 106 VGQGIGFEIFDDLKVGQTDFVQKINYQRALQGELIRTISEFPGVETARVHLVIPHRSLFI 165
              G   EIF    +  T   +++ Y   +  EL RT+    GV TARVH+VIP      
Sbjct: 92  ARLG---EIFRKQGLVATPAEERVRYLYGMSEELSRTLQAMDGVVTARVHVVIPENDPLS 148

Query: 166 EEQQKPSASVVVKLREGKKMEAQDVQAIVNLVVMAVEGMDRNRVSV 211
           ++ +  SA+V +K R+G  + A     + +LV  ++EG++ + VS+
Sbjct: 149 DKVRPSSAAVYIKYRDGVNLRAM-TPMVKDLVAHSIEGLNYDNVSL 193