Pairwise Alignments

Query, 538 a.a., flagellar M-ring protein FliF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 561 a.a., flagellar MS-ring protein (RefSeq) from Shewanella sp. ANA-3

 Score =  169 bits (428), Expect = 3e-46
 Identities = 137/500 (27%), Positives = 244/500 (48%), Gaps = 37/500 (7%)

Query: 21  MSQRVFIVGLALVTVGIFFTLILWINRPDYRVLYSNLAGEDANRVVKLLQANKVPYKLEN 80
           M Q   I+ LA+      F +I W   P+YR L   +  ++  +V+ +L  NK+ Y++E 
Sbjct: 32  MRQITMILALAICLALAVFVMI-WAQEPEYRPL-GKMETQEMVQVLDVLDKNKIKYQIEV 89

Query: 81  DGGTVLVPADKLYDLRIKVAGEG-NLVGQGIGFEIFDDLKVGQTDFVQKINYQRALQGEL 139
           D   V VP DK  ++++ ++  G N         +  D   G +  +++   + + +  L
Sbjct: 90  D--VVKVPEDKYQEVKMMLSRAGVNSPAASTQDFLTQDSGFGVSQRMEQARLKHSQEENL 147

Query: 140 IRTISEFPGVETARVHLVIPHRSLFIEEQQKPSASVVVKLREGKKMEAQDVQAIVNLVVM 199
            R I +   V  A+V L +P  ++F     +PSA+VV+  R G   + + V AIV++V  
Sbjct: 148 ARAIEQLQSVSRAKVILALPKENVFARNTSQPSATVVINTRRGGLGQGE-VDAIVDIVAS 206

Query: 200 AVEGMDRNRVSVADTSGKILYYPTEDDSLQGLTTTQLEYKMRLQQNLERRIEELLYPVIG 259
           AV+G++ +RV+V D++G++L   ++D  +      +LE   + +     +I+ +L P++G
Sbjct: 207 AVQGLEPSRVTVTDSNGRLLNSGSQD-GISARARRELELVQQKEAEYRTKIDSILSPILG 265

Query: 260 PGKVIAKVNADVDFSQRTIRRELYDPEKTVVRSEQRSEESTRGRAN------------LE 307
           P    ++V+  +DF+      + ++P+   +RSE   E ++ G +             +E
Sbjct: 266 PDNFTSQVDVSMDFTAVEQTAKRFNPDLPSLRSEMTVENNSTGGSTGGIPGALSNQPPME 325

Query: 308 AGAP-DANFRGDGISGSASTQEGTRETRTTNFEINKEEQNIVANVGDLSRLSVAVIVDGT 366
           +  P DA    + ++   S +E TR     NFE++    +    +G + R+SV+V VD  
Sbjct: 326 SNIPQDATKATESVTAGNSHREATR-----NFELDTTISHTRQQIGVVRRVSVSVAVDFK 380

Query: 367 YEKAAD-GTYTFVPRNAEEMQRIRQLVSSAVGYDRARGDTVEVNSISFGG---PDLPQEA 422
              A + G    V R  +E+  IR+L+  AVG+   RGD +EV ++ F      D+P   
Sbjct: 381 PGAAGENGQVARVARTEQELTNIRRLLEGAVGFSAQRGDVLEVVTVPFMDQLVEDVPAPE 440

Query: 423 SLPQLFLDYALRLGKPLLNALLVFLFLLLVVRPVVMALIRPKVEGEMIEGLEGLPAGEER 482
              Q +   A++LG   + AL++ + +L VVRP++  LI P    + +   E    G E 
Sbjct: 441 LWEQPWFWRAVKLG---IGALVILVLILAVVRPMLKRLIYP----DSVNMPEDSRLGNE- 492

Query: 483 LALIEGDEEVDALDALRKIE 502
           LA IE     D L  L   E
Sbjct: 493 LAEIEDQYAADTLGMLNTKE 512