Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 300 a.a., putative DNA-binding transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 93.6 bits (231), Expect = 5e-24
 Identities = 89/312 (28%), Positives = 134/312 (42%), Gaps = 39/312 (12%)

Query: 4   SWEQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPEG 63
           S + +E     A++GSF+AAA +L K  SAVS AI  +E +LGV LF+R      LT  G
Sbjct: 3   SEQSLELVDIVAQVGSFTAAAAKLHKVPSAVSYAIKQIEDELGVVLFNRHHRSVSLTVAG 62

Query: 64  EALLGDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALVDRLTGFAERWPDVE 123
           E  + +A  +L++ +        +A G +P L +A+D +     +   +  F   + DVE
Sbjct: 63  EHFVREARAMLSQMDELKRGTQRIANGWQPTLSIALDNIVRADKISVLIADFYRHFQDVE 122

Query: 124 MEFLFGIVGDIALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAGAV 183
           +     +   +   +A GR+H+ I    A P G                    Y   G +
Sbjct: 123 LIIRIEVFNGVWEALATGRSHIAIGATTAIPVG----------------GVFQYRDMGVI 166

Query: 184 PALPVVAAGHPLAGRRA-VSPDELEALRQLDITSRGGERPDALSGQVWRVDSYWAL--RD 240
               +V+  HPLA   A +S D L     + +     E P   +   W +D+   L   D
Sbjct: 167 DWAFLVSKNHPLASIEAPLSDDMLRPFPSICLEDTSREIPKRTT---WLLDNQRRLVVPD 223

Query: 241 LVRA------GLGWAYLPESLAASDLDAGRLVRLDL----APAGEVWRWPLYLVRDARRA 290
            +RA      GLG  Y+P  LAA  + AG L+   L    AP+     W          A
Sbjct: 224 WIRAINCFTNGLGIGYMPRHLAAPFIQAGLLMEKTLEQPKAPSPCCLAW-------NGDA 276

Query: 291 PGPAARWLLEAL 302
           P PA  W+L+ L
Sbjct: 277 PSPALSWVLDYL 288