Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 86/301 (28%), Positives = 130/301 (43%), Gaps = 46/301 (15%)

Query: 18  GSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPEGEALLGDAERLLARG 77
           GSF+ AA  L KAQSAVS  I  LE  LGV+L  R  +   LT EG  +L + +RLL+  
Sbjct: 18  GSFAKAAERLHKAQSAVSYQIKKLEQHLGVSLLSREQYRAELTAEGRVILAEGQRLLSHL 77

Query: 78  ERFGSRAATLATGVEPRLVLAVDELAWGPALVDRLTGFAERWP----DVEMEFLFGIVGD 133
                 A+  + G EP+L L +D       ++  L   AE        + MEFL G+   
Sbjct: 78  ANIEHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHR 137

Query: 134 IALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAGAVPALPVVAAGH 193
                   R +  +M+      G   YA+                P  A+ ++ + A  H
Sbjct: 138 FE------RDNADLMLVKDYRTGPYYYAK----------------PLPAITSVLLAAPHH 175

Query: 194 PLAGRRAVSPDELEALRQLDITSR------------GGERPDALSGQVWRVDSYWALRDL 241
           PLAGR+A++  EL+   +L I               GG++   LSG + +       ++ 
Sbjct: 176 PLAGRKALTLTELQQHVELTIEDSSPVKTYRDELQFGGDKVFYLSGFIMK-------KNA 228

Query: 242 VRAGLGWAYLPESLAASDLDAGRLVRLDLAPAGEVWRWPLYLVRDARRAPGPAARWLLEA 301
           +  GLG+ ++P+ L   +L AG L  +D    G  + +   LV    R  G A R   E 
Sbjct: 229 LLKGLGFGWMPDFLVRDELKAGLLTEIDFV-GGSRYTFVPQLVSTLERPLGRAGRLFTEL 287

Query: 302 L 302
           +
Sbjct: 288 I 288