Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 296 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 83/270 (30%), Positives = 128/270 (47%), Gaps = 23/270 (8%)

Query: 6   EQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPEGEA 65
           ++V+AFV AA+LGS SAAAR+LGK Q  VS  IA LE DLGV LF R  +   L+  G+ 
Sbjct: 5   QRVKAFVIAAQLGSVSAAARQLGKRQPQVSQWIAELEVDLGVQLFQRGANQVELSLAGQH 64

Query: 66  LLGDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALVDRLTGFAERWPDVEME 125
           LL  A   L++ E+F S AA  AT  +  + L V+       L+  +  F E++P V   
Sbjct: 65  LLPRAILALSQWEQFSSSAAHFATYQKGIICLGVESHIPLNGLITVVNTFFEQFPAV--N 122

Query: 126 FLFGIVGDIALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAGAVPA 185
           F+  +     L  A    ++ +++                +  E  L  + Y   G    
Sbjct: 123 FVLQVDKLTVLNEAFNAGNIDLLL--------------RHQSDELHLTEVGYCRIGKYKE 168

Query: 186 LPVVAAGHPLAGRRAVSPDELEALRQLDITSRGGER-----PDALSGQVWRVDSYWALRD 240
           + +V+   PL+ +  V+P EL   R  +    GG+          SG    +     L+ 
Sbjct: 169 VLLVSRQSPLSKQAIVAPSELAIYR--EYVWAGGQACCEDLEVGFSGHYCVIPDLGLLKK 226

Query: 241 LVRAGLGWAYLPESLAASDLDAGRLVRLDL 270
           L+  G G+A+LP SLA ++++ G L  + L
Sbjct: 227 LLIDGSGYAFLPLSLAQTEINQGLLTVVKL 256