Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 309 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  140 bits (354), Expect = 3e-38
 Identities = 112/312 (35%), Positives = 153/312 (49%), Gaps = 35/312 (11%)

Query: 4   SWEQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPEG 63
           S +Q+  FV+ A  GSF AAAR+L +AQSAVS AIA+LE  LG+ LFDR+G+ P LT  G
Sbjct: 7   SLDQLRVFVQVADSGSFLAAARKLARAQSAVSYAIASLEEQLGLLLFDRSGYRPQLTAPG 66

Query: 64  EALLGDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALVDRLTGFAERWPDVE 123
           EALL DA ++L   +    RA++ A G E  + LAVD       LVD L  F   +P V 
Sbjct: 67  EALLADARQVLDHVDSLQVRASSYARGQELEMALAVDVFFPLDCLVDLLQRFRAAFPAVT 126

Query: 124 MEFLFGIVGDIALMVAEGRAHMGIM--VPLADPRGRRVYAEEAWRDAESRLAGLDYFPAG 181
           +      +G +A  V +GRA +GI+  +P   P   R+                      
Sbjct: 127 VRLEVEALGAVAERVIDGRAMLGILGTLPTTPPNLMRI-------------------TLP 167

Query: 182 AVPALPVVAAGHPLA---GRRA----VSPDELEALRQLDITSRGGERPDALSGQVWRVDS 234
           +V  + VVA  HPLA   GR A    +   +L    + ++T+R  +     S   WR+  
Sbjct: 168 SVRLVAVVAPHHPLAKVKGRIAEKMLLQQTQLVLSDRSELTAR--QDFSVHSRLTWRMSD 225

Query: 235 YWALRDLVRAGLGWAYLPESLAASDLDAGRLVRLDL---APAGEVWRWPLYLVRDARRAP 291
                 L+RAG+GW  +P  +   DL AGRLV +      P G     P+  V       
Sbjct: 226 LGTKHALLRAGMGWGNMPLHVVKEDLAAGRLVSISTIHHPPQGA--ELPIQCVYKPDHRA 283

Query: 292 GPAARWLLEALA 303
           GPA  W L+ALA
Sbjct: 284 GPALSWWLDALA 295