Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 84/304 (27%), Positives = 131/304 (43%), Gaps = 42/304 (13%)

Query: 18  GSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPEGEALLGDAERLLARG 77
           GSF+ AA  L KAQSAVS  +  LE  LGV LF R  +   LT EG  +L + +RLL   
Sbjct: 18  GSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSRDQYRAELTSEGRVILAEGQRLLQHL 77

Query: 78  ERFGSRAATLATGVEPRLVLAVDELAWGPALVDRLTGFAERWPDVEMEFLFGIVGDIALM 137
                 A+  + G EP+L L +D       ++  L   AE     +++     +G +   
Sbjct: 78  ANIEHLASRFSEGWEPKLELVIDGALPMEPIMTALKRMAEHQIPTKIQLNMEFLGGVQHR 137

Query: 138 VAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAGAVPALPVVAAGHPLAG 197
                A + ++    D R    Y  +               P  A+ ++ V +A HPLA 
Sbjct: 138 FERDNADLMLV---KDYRTGPYYHPQ---------------PLPAITSVLVTSALHPLAQ 179

Query: 198 RRAVSPDELEALRQLDITSR------------GGERPDALSGQVWRVDSYWALRDLVRAG 245
           ++ +S  EL+   +L I               GG++   LSG + +       ++ +  G
Sbjct: 180 QKHISLPELQQHVELTIEDSSPNKTYRDELQFGGDKVFYLSGFIMK-------KNALLKG 232

Query: 246 LGWAYLPESLAASDLDAGRLVRLDLAPAGEVWRWPLYLVRDARRAPGPAAR----WLLEA 301
           LG+ +LP+ L   +L +G LV +D    G  + +   LV    R  G A +     +LE 
Sbjct: 233 LGFGWLPDFLVQEELLSGELVEVDFV-GGSRYTFTPQLVSTLERPLGRAGKLFTELILEE 291

Query: 302 LAKA 305
            AKA
Sbjct: 292 FAKA 295