Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 303 a.a., putative DNA-binding transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 88/308 (28%), Positives = 134/308 (43%), Gaps = 31/308 (10%)

Query: 4   SWEQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPEG 63
           S + +E     AR+GSF+AAA  L K  SAVS A+  +E +LGV LF+R      LTP G
Sbjct: 6   SEQALELIDIVARVGSFTAAANRLHKVPSAVSYAVKQIEEELGVVLFERHHRSVTLTPAG 65

Query: 64  EALLGDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALVDRLTGFAERWPDVE 123
           E  +  A  LL + +        +A G +P L +A+D +     +   +  F   + D+E
Sbjct: 66  EHFVKQARNLLTQMDEMKRGTQRVANGWQPTLSIALDNIVRADRISVLIADFYRHFQDIE 125

Query: 124 MEFLFGIVGDIALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAGAV 183
           +     +   +   +A GR+ + I    A P G  VY                Y   G +
Sbjct: 126 LIIRIEVFNGVWEALATGRSDIAIGATTAIPVG-GVY---------------QYKDMGDI 169

Query: 184 PALPVVAAGHPLAG-RRAVSPDELEALRQLDITSRGGERPDALSGQVWRVDSYWAL--RD 240
               +V+  HPLA   R ++ DEL     + +     E P  ++   W +++   L   D
Sbjct: 170 QWAFLVSKNHPLASIDRPLTDDELRPFPSICLEDTSREIPKRMT---WLLENQRRLVVPD 226

Query: 241 LVRA------GLGWAYLPESLAASDLDAGRLVRLDLAPAGEVWRWPLYLVRDARRAPGPA 294
            +RA      GLG  Y+P  LA+  + AG LV   L         P  L  +A +   PA
Sbjct: 227 WIRAINCFREGLGIGYMPVHLASVFIKAGALVEKQL--ENPKLTSPCCLAWNADKM-SPA 283

Query: 295 ARWLLEAL 302
             W+L+ L
Sbjct: 284 LAWVLDYL 291