Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 85/306 (27%), Positives = 135/306 (44%), Gaps = 24/306 (7%)

Query: 6   EQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPEGEA 65
           EQ+  F   A  GS  AA+ +L K Q A+S +I  LE+ L + LFDR G+   LT EG  
Sbjct: 4   EQLLMFNTVALAGSLKAASDKLHKTQPAISQSIKQLESQLDLVLFDRQGYRLTLTQEGRK 63

Query: 66  LLGDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALVDRLTGFAERWPDVEM- 124
           LL  A+R+L   +     A  LA G E  + LA +       ++  L      +P  ++ 
Sbjct: 64  LLQYAQRVLNEAQEMRQVAKHLAKGNEASITLAFEASFNLTRILPILERTQNEFPHTQII 123

Query: 125 ---EFLFGIVGDIALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAG 181
              E+L G +      + +G+A + I     +P           R +   LA   Y  +G
Sbjct: 124 LKQEYLTGALE----ALNQGKADIAISAGGIEP----------IRSSHFELA---YLFSG 166

Query: 182 AV--PALPVVAAGHPLAGRRAVSPDELEALRQLDITSRGGERPDALSGQ-VWRVDSYWAL 238
           ++   A P + + HP  G      +E + + Q   T          +GQ  W V+ ++  
Sbjct: 167 SLLDVASPRLLSRHPTLGHVRELVNEYQIVIQDTGTGTANIEFGVQAGQRRWYVNDFYTK 226

Query: 239 RDLVRAGLGWAYLPESLAASDLDAGRLVRLDLAPAGEVWRWPLYLVRDARRAPGPAARWL 298
           R L+++G+GW  LP  L    L  G L+ L+L     + +   Y++R      GP A+ L
Sbjct: 227 RMLIQSGMGWGKLPHYLVEQALADGSLLPLELRERQNLIQLDYYVMRPPHSPLGPVAQAL 286

Query: 299 LEALAK 304
            E L +
Sbjct: 287 WENLVQ 292