Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 293 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  163 bits (412), Expect = 5e-45
 Identities = 117/304 (38%), Positives = 161/304 (52%), Gaps = 25/304 (8%)

Query: 8   VEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPEGEALL 67
           ++  + AA  GSFSAAAR+LGKAQS VST I+NLE DL + LF+R G  P LT  G  ++
Sbjct: 8   LKILIAAAETGSFSAAARKLGKAQSVVSTTISNLEIDLDLTLFERTGRYPQLTQAGVRIV 67

Query: 68  GDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALVDRLTGFAERWPDVEMEFL 127
            +AE LLA+ +R  + A  LA+GVE RL LA+D+ +  P L   L  FA R+P VE+E L
Sbjct: 68  QEAEVLLAQSQRLQAIAGELASGVETRLTLAIDDDSHLPWLGSLLEHFATRFPMVELELL 127

Query: 128 FGIVGDIALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAGAVPALP 187
           F ++ D+  ++  GRA +GI     +P    V                  +  G V    
Sbjct: 128 FPLMEDVTDLLLTGRAQLGICYKNENPHREIV-----------------TYTLGEVAMPI 170

Query: 188 VVAAGHPLAGRRAVSPDELEALRQLDITSR--GGERPD-ALSGQVWRVDSYWALRDLVRA 244
           VV+  HPLA ++ ++  +L+  RQL +T R  G ER    LS QVW V+    + + V+ 
Sbjct: 171 VVSTEHPLARKQPLNEIDLQGSRQLLVTGRREGSERQRFRLSAQVWWVEGDLGVMEFVKR 230

Query: 245 GLGWAYLPESLAASDLDAGRLVRLDLAPAGEVWRWPLYLVRDARR--APGPAARWLLEAL 302
           GLGWA +P  L    L    +V L+   +  + R  L L     R  A G A RWL E L
Sbjct: 231 GLGWAAIPAFLIQEALARQEVVVLE---SDLISRHALTLELQWHRALALGQAGRWLKETL 287

Query: 303 AKAV 306
              V
Sbjct: 288 QSKV 291