Pairwise Alignments

Query, 477 a.a., exopolysaccharide biosynthesis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 649 a.a., WecB/TagA/CpsF family glycosyl transferase (RefSeq) from Shewanella sp. ANA-3

 Score =  189 bits (479), Expect = 3e-52
 Identities = 95/199 (47%), Positives = 139/199 (69%), Gaps = 3/199 (1%)

Query: 279 VKRTLDLIATTLALPLILPVMAVIALCIRLETPGPALFTQRRIGRDGYHFDILKFRTMYN 338
           VKR LD++   +A+ L+ P++ ++AL IRLE+PG  LF Q+R+G+    F + KFR+MY 
Sbjct: 454 VKRCLDILVAAIAILLLSPLLLIVALLIRLESPGAVLFCQQRVGKWNQPFTMWKFRSMYQ 513

Query: 339 DADTRLAECLEQSPELDAEWRRDHKLRCDPRVTRVGAFLRKTSLDELPQLWNVLRGDMSL 398
           DA+TRLA  L+Q+ E+        K++ DPR+TRVG F+RKTS+DELPQLWNVL+G+MSL
Sbjct: 514 DAETRLAS-LQQANEMQGGVL--FKMKQDPRITRVGQFIRKTSIDELPQLWNVLKGEMSL 570

Query: 399 VGPRPIVDSEVQRYDAAFATYTRVRPGITGLWQVSGRNNLSYPERVQRDMYYISNWSVWF 458
           VGPRP +  EV +Y  +      V+PGIT +WQVSGR+++ +  +V+ D+ YI   S+  
Sbjct: 571 VGPRPALPREVAQYSPSDRRRLEVKPGITCIWQVSGRSDIPFDRQVELDVDYIYQQSLMA 630

Query: 459 DIWIIARTIPVVLHRDGAY 477
           D+ ++ +TIP V+   GAY
Sbjct: 631 DLSLLIKTIPAVIFSRGAY 649



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 7/36 (19%)

Query: 385 LPQLWNVLRGDMSLVGPR------PIVD-SEVQRYD 413
           LPQL+N+L+GD+ L+G        P+VD  +V R D
Sbjct: 73  LPQLFNLLKGDIGLLGVEAQFAFTPLVDLPQVNRID 108