Pairwise Alignments

Query, 657 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 444 a.a., Helix-turn-helix, Fis-type from Pseudomonas syringae pv. syringae B728a

 Score =  105 bits (262), Expect = 4e-27
 Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 20/175 (11%)

Query: 1   MSESILLVDDEEGIRKVLGITLADAGYRVTTAADGEEAMRRFAEERPDIVLTDIKMPGMS 60
           M  S+++VDDE  IR+ +   L  +G+ V   A  EE +    E  P +VLTD++MPGMS
Sbjct: 1   MLNSVIVVDDEAPIRQAVEQWLTLSGFEVQVFARAEECLAHLPEHFPGVVLTDVRMPGMS 60

Query: 61  GLELLESIKSRDSEVEVIMLTGHGDMELAIQSLKRDATDFITKPINDDVLDIALGRA--- 117
           GLELL  ++  D ++ VI+LTGHGD+ +A+++++  A DF+ KP + + L   L RA   
Sbjct: 61  GLELLTRLQGADRDLPVILLTGHGDVPMAVEAMREGAYDFLEKPFSPETLISNLRRALEK 120

Query: 118 RERITMRRRLREYTENLEDMVAKQSARLVAAERQLAALQVMDGIASGVQTLSRML 172
           R+ +   RRL E  +               A  +L A   + G++ G+QTL R +
Sbjct: 121 RQLVLENRRLHEQAD---------------ARTRLDA--TLLGVSPGMQTLRRQV 158