Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1475 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

 Score =  122 bits (305), Expect = 3e-31
 Identities = 104/347 (29%), Positives = 160/347 (46%), Gaps = 36/347 (10%)

Query: 137 QARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFLRDPDA--------RAIYLFPLKA 188
           QA A  +IRAGR  +VA PT SGKT    L  ++  ++   A        R +Y+ PLKA
Sbjct: 54  QAAAWPLIRAGRSTLVAAPTGSGKTLTAFLAAIDGLVQQGLAEGGLADATRVLYVSPLKA 113

Query: 189 LAQDQLATFN----ALTAHWPRDARPA----AAIYDGDTTDHFRRKIRNAPPPVLLTNPE 240
           L+ D           +TA   R   P      A+  GDT    R  +R   P +L+T PE
Sbjct: 114 LSNDIHINLEEPLAGITAELARLGLPPLEIRTAVRTGDTPQAERNAMRKRVPHILVTTPE 173

Query: 241 MLHLALLPHHEQWASLFASLTHVVVDEVHTYRG-VLGAHMAQVFRRLRRVCERYGAQPSF 299
            L++ L         + A +  V+VDE+H   G   G+H+A    RL  +C R   +   
Sbjct: 174 SLYVLL--SSASGREMLADVQSVIVDEIHAIAGNKRGSHLALSLERLEALCNRPLVR--- 228

Query: 300 VFCSATVGNPGELAHNLTGLT-PEVVTESGAPQGKRHFIFLDPEESPATAAIQ------- 351
           V  SAT      +A  L G+  P  + + G   G+   + L+    P  A +        
Sbjct: 229 VGLSATQKPIDAVARFLAGVERPCEIVDIG--HGRARDLALEVPSVPLEAVMSNDAWALV 286

Query: 352 --LLRSALKRGLRTIVYCQSRRMTELVSLWAAEKSGPYRDRISAYRAGFLPEERRDVEAR 409
              L +       T+V+  +RRM E  +   AE+ G   + ++A+      E+R   E +
Sbjct: 287 YDRLAALAGEHRTTLVFVNTRRMAERTTRHLAERLGA--EVVAAHHGSLAREQRLSAEQK 344

Query: 410 MASGQLLAVITTSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVG 456
           +  G+L  ++ T++LELGIDIG ++L   +G P ++ + LQR GR G
Sbjct: 345 LKRGELRVLVATASLELGIDIGDVELVCQLGSPRSISAFLQRVGRAG 391