Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 863 a.a., Lhr-like helicases from Pseudomonas stutzeri RCH2

 Score = 70.1 bits (170), Expect = 7e-16
 Identities = 90/359 (25%), Positives = 139/359 (38%), Gaps = 39/359 (10%)

Query: 134 YSHQARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFL----------RDPDARAIYL 183
           +  Q      I  G   ++   T SGKT+   L  L +F           +      +++
Sbjct: 21  FPFQREVWQAIDRGESGLLHATTGSGKTYAVWLGALNRFATKAPRPNTTDKPAPLTVLWI 80

Query: 184 FPLKALAQDQLATFNA----LTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLTNP 239
            P++ALA D      A    L  +W      +  +  GDT+   R +     P  L+T P
Sbjct: 81  TPMRALAADTARALQAPLYDLGINW------SIGLRTGDTSGAERARQGRRLPSALVTTP 134

Query: 240 EMLHLALLPHHEQWASLFASLTHVVVDEVHTYRG-VLGAHMAQVFRRLRRVCERYGAQPS 298
           E L L L     + A  FA L  +VVDE H   G   G  +     RLR+        P 
Sbjct: 135 ESLTLLLTRADARQA--FAGLRMLVVDEWHELLGNKRGVQLQLALARLRQW------MPE 186

Query: 299 FVF--CSATVGNPGELAHNLTGLTPEVVTESGAPQGKRHFIFLDP--EESPATAAIQL-- 352
            +    SAT+GN       L       + +    +  R    L P  E  P    + L  
Sbjct: 187 LIVWGLSATLGNQPHALDVLLYPGSGRLVQGKVDKDLRVDTLLPPCIERFPWAGHLGLRM 246

Query: 353 ---LRSALKRGLRTIVYCQSRRMTELVSLWAAEKSGPYRDRISAYRAGFLPEERRDVEAR 409
              +   +     T+V+  +R  +E+      +    +   I+ +      E R  VE  
Sbjct: 247 LPQVVEEIDSAATTLVFTNTRSQSEIWYQALLDARPDWAGLIALHHGSLAREVRDWVEQG 306

Query: 410 MASGQLLAVITTSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVGRA-RQESAVVLV 467
           +  G L AV+ TS+L+LG+D   ++  + +G P  V   +QR GR G A  + S V LV
Sbjct: 307 LKQGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRTSRVTLV 365