Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 830 a.a., FIG003033: Helicase domain protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 77.4 bits (189), Expect = 4e-18
 Identities = 97/362 (26%), Positives = 140/362 (38%), Gaps = 49/362 (13%)

Query: 147 GRDVVVATPTASGKTFI-YNLPVLEQFL---RDPDARAI--------------YLFPLKA 188
           G   ++ TPT SGKT   +  P+LE      R P A A+              ++ PL+A
Sbjct: 40  GESGLLHTPTGSGKTLAAFGGPLLEALAARGRTPPATAVARGRRQPQRSLQVLWITPLRA 99

Query: 189 LAQDQLATFN----ALTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLTNPEMLHL 244
           LA D          AL   W    R       GD +   +R  R+    VL+T PE L  
Sbjct: 100 LAADTARALREPVEALGLDWQVGLRT------GDASARDKRLARSGKLDVLVTTPESL-- 151

Query: 245 ALLPHHEQWASLFASLTHVVVDEVHTYRGVLGAHMAQV-FRRLRRVCERYGAQPSFVFCS 303
           ALL  +   A   A+L  V+VDE H   G     + Q+   RLR     +         S
Sbjct: 152 ALLLSYPDTAPQLAALRCVIVDEWHELLGNKRGVLLQLCLARLRS----WSPALRIWGLS 207

Query: 304 ATVGNPGELAHNLTGLTPEVVTESGAPQGKRHFIFLDPEESP--------ATAAIQLLRS 355
           AT+GN  +    L    P+    SG          L PE             A +  +  
Sbjct: 208 ATLGNLAQARDVLLPHQPDAALVSGVKPRAMTLETLLPETGERFPWAGHLGLAQLARVLH 267

Query: 356 ALKRGLRTIVYCQSRRMTELVSLWAAEKSGPYRD---RISAYRAGFLPEERRDVEARMAS 412
            L     ++V+  +R   EL   W    S  + +    ++ +     P  R   E  +  
Sbjct: 268 KLMEQRTSLVFTNTRAQAEL---WHQALSAVWPEDAATLALHHGSLDPALRTAAEHGLRD 324

Query: 413 GQLLAVITTSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVGRARQESAVVLVAGEDA 472
           G L  V+ TS+L+LG+D  ++D  + VG P  +   LQR GR      ES  V+     A
Sbjct: 325 GSLRCVVATSSLDLGVDFPAVDQVLQVGSPKGIARLLQRAGRARHRPGESGHVVCVPSHA 384

Query: 473 LD 474
           L+
Sbjct: 385 LE 386