Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 830 a.a., Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score = 73.9 bits (180), Expect = 5e-17
 Identities = 89/361 (24%), Positives = 142/361 (39%), Gaps = 38/361 (10%)

Query: 134 YSHQARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFL-------------RDPDAR- 179
           ++ Q      ++ G   ++   T SGKT+      L +F              R P A  
Sbjct: 20  FAFQKEVWAAVKNGESGLLHASTGSGKTYAVWFAALNRFAKANTLTADNKPRKRKPPAEP 79

Query: 180 --AIYLFPLKALAQDQLATFNALTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLT 237
              +++ P++ALA D      A  A    D   +  +  GDT+   R +     P  L+T
Sbjct: 80  LSVLWITPMRALAADTARALEAPLAEL--DIPWSVGLRTGDTSGSERARQSRRLPSALIT 137

Query: 238 NPEMLHLALLPHHEQWASLFASLTHVVVDEVHTYRG-VLGAHMAQVFRRLRRVCERYGAQ 296
            PE L L L     Q A   ++L  VVVDE H   G   G  +     RLRR    +  Q
Sbjct: 138 TPESLTLLLTRADAQVA--LSTLKMVVVDEWHELIGNKRGVQLQLALARLRR----WNPQ 191

Query: 297 PSFVFCSATVGNPGELAHNLTG---------LTPEVVTESGAPQGKRHFIFLDPEESPAT 347
                 SAT+GN       L G         +  ++  ++  P     F +         
Sbjct: 192 LIVWGISATLGNQQHAQQVLIGDGGVTVQGKIVKDLQVDTLLPSSIERFPWAG---HMGL 248

Query: 348 AAIQLLRSALKRGLRTIVYCQSRRMTELVSLWAAEKSGPYRDRISAYRAGFLPEERRDVE 407
             +  + + ++     +V+  +R  +E+      E    +   I+ +      E R  VE
Sbjct: 249 RMLPQVVAEVESSASCLVFTNTRAQSEIWYQALLEARPDWAGLIALHHGSLAREVRDWVE 308

Query: 408 ARMASGQLLAVITTSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVGRA-RQESAVVL 466
             +  G L AV+ TS+L+LG+D   ++  + +G P  V   +QR GR G A  + S V L
Sbjct: 309 RALKEGALKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGHAPGRPSRVTL 368

Query: 467 V 467
           V
Sbjct: 369 V 369