Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 849 a.a., DNA damage response helicase, ligase-associated (from data) from Sinorhizobium meliloti 1021

 Score =  100 bits (249), Expect = 5e-25
 Identities = 106/356 (29%), Positives = 155/356 (43%), Gaps = 34/356 (9%)

Query: 135 SHQARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFLR----DPDA-----RAIYLFP 185
           +HQ        AG   ++  PT +GKT    LP L    R     P A       +Y+ P
Sbjct: 36  AHQLELLSRAEAGESTLLIAPTGAGKTLAGFLPSLVDITRRGRIPPGAPFTGIHTLYISP 95

Query: 186 LKALAQDQLATFNALTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLTNPEMLHLA 245
           LKALA D     N +          +     GDT    R++ +  PP +LLT PE L  A
Sbjct: 96  LKALAVD--IERNLMKPVGEMGLPVSIENRTGDTPQGKRQRQKLNPPDILLTTPEQL--A 151

Query: 246 LLPHHEQWASLFASLTHVVVDEVHTYRGVLGAHMAQV-FRRLRRVCERYGAQPSFVFCSA 304
           LL  + +    F  L +VV+DE+H+       H+  +   RLRR+  R          SA
Sbjct: 152 LLLANGEAERFFKDLRYVVLDELHSLVMSKRGHLLSLGLARLRRLAPRLQTMG----LSA 207

Query: 305 TVGNPGELAHNLTG--LTPE----VVTESGAPQGKRHFIFLDPEES----PATAAIQLLR 354
           TV +P +L   L    L  E    ++T SG  + +   +  + +       A  AI  + 
Sbjct: 208 TVADPMDLQRWLVAQFLAKENHAGLITVSGGAKPEISILRTENQVPWAGHSARYAIPDVY 267

Query: 355 SALKRGLRTIVYCQSRRMTELV--SLWAAEKSGPYRDRISAYRAGFLPEERRDVEARMAS 412
           +A+K    T+++  +R   E++   LW           I+ +       +RR VEA MA 
Sbjct: 268 AAIKEHRTTLLFVNTRSQAEMLFQELWKINDDDL---PIALHHGSLDVAQRRRVEAAMAE 324

Query: 413 GQLLAVITTSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVG-RARQESAVVLV 467
            +L AV+ TS L+LGID G +DL + VG P       QR GR   R  + S  +LV
Sbjct: 325 NRLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRIGRANHRMDEPSRAILV 380