Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 771 a.a., Probable helicase from Mycobacterium tuberculosis H37Rv

 Score =  490 bits (1262), Expect = e-142
 Identities = 310/783 (39%), Positives = 421/783 (53%), Gaps = 49/783 (6%)

Query: 80  VAEYIAALLASRTFG-----RQVRHHRVIPQREAQTAPQHRP-WTRA-VQDILTRQGIAD 132
           +A + + LLA+   G     R +RH   +P +  +  P+  P W    V D    +GI+ 
Sbjct: 1   MASFGSHLLAAAVAGTPPGERPLRHVAELPPQAGR--PRGWPEWAEPDVVDAFADRGISS 58

Query: 133 LYSHQARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFLRDPDARAIYLFPLKALAQD 192
            +SHQA A ++  AGR VV+ T  ASGK+  Y L VL     D  ARA+YL P KAL  D
Sbjct: 59  PWSHQAEAAELAYAGRHVVIGTGPASGKSLAYQLLVLNALATDSRARALYLSPTKALGHD 118

Query: 193 QLATFNALTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLTNPEMLHLALLPHHEQ 252
           QL   +AL A  PR A  A   YDGD+ D  RR  R      L +NPEM HL++L +H +
Sbjct: 119 QLRAAHALAAAVPRLADVAPTAYDGDSPDEVRRFARERSR-WLFSNPEMTHLSVLRNHAR 177

Query: 253 WASLFASLTHVVVDEVHTYRGVLGAHMAQVFRRLRRVCERYGAQPSFVFCSATVGNPGEL 312
           WA L  +L  V+VDE H YRGV G+++A V RRL R+C RY A P+ +F SAT  +PG  
Sbjct: 178 WAVLLRNLRFVIVDECHYYRGVFGSNVAMVLRRLLRLCARYSAHPTVIFASATTASPGAT 237

Query: 313 AHNLTGLTPEVVTESGAPQGKRHFIFLDP--------------EESPATAAIQLLRSALK 358
           A +L G     VTE G+P+G R     +P                S    A +++   + 
Sbjct: 238 AADLIGQPVVEVTEDGSPRGARTVALWEPALRSDVIGEHGAPVRRSAGAEAARVMADLIV 297

Query: 359 RGLRTIVYCQSRRMTELVSLWAAEK----SGPYRDRISAYRAGFLPEERRDVEARMASGQ 414
            G +T+ + +SRR  EL +L A  +    +    D +++YRAG+L E+R  +   +A GQ
Sbjct: 298 EGAQTLTFVRSRRAAELTALGARARLVDIAPELSDTVASYRAGYLAEDRSALHQALAEGQ 357

Query: 415 LLAVITTSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVGRARQESAVVLVAGEDALD 474
           L  + TT+ALELG+DI  LD  +L G+PGTV S  Q+ GR GR  Q + VVL+A +D LD
Sbjct: 358 LRGLATTNALELGVDIAGLDAVVLAGFPGTVASFWQQAGRSGRRGQGALVVLIARDDPLD 417

Query: 475 QYFMRHPEDFFARGAEHAVLNPDNPVILARHLECAAAEIPLSAADPWLASPGASEAVQRL 534
            Y + HP     +  E  V++P NP +L   L CAA E+PL  A+  + S GA E  + L
Sbjct: 418 TYLVHHPAALLDKPVERVVIDPVNPHLLGPQLLCAATELPLDDAE--VRSWGAVEVAESL 475

Query: 535 EREGLLLRSADGSTLLASRKRPQRHVDLRGS--GSTYTIEDGEGHIIGSVDGHRALRETH 592
             +G LLR  +G    A   +P   VD+RG+  G    +E G G ++GSV   +A    H
Sbjct: 476 VDDG-LLRRRNGRYFPAPGVKPHAAVDVRGAIGGQIVIVEAGTGRLLGSVGVGQAPAAAH 534

Query: 593 PGAVYLHRGRTWVVQQLDPGARKVMASPARVGWYTRVRGNKQTEILDVQDRREAWGTRVF 652
           PGAVYLH+G T+VV  LD             G+ T  R     E+ D+       G R+ 
Sbjct: 535 PGAVYLHQGETYVVDSLDFQDGIAFVHAEDPGYATFAR-----EVTDI--AVTGTGERLV 587

Query: 653 FG-------RLRVTETVTGYEKRSASGGRLLGVTPLDLPPTVFETEGLWFEIPDAAREAT 705
           FG        + VT  V GY +R  S G +L    LD+P     T  + + I   A   +
Sbjct: 588 FGPVALGLVPVTVTNHVVGYLRRQLS-GEVLDFVELDMPEHTLPTTAVMYTITSDALVRS 646

Query: 706 ERELLHFMGSIHALEHAAIGILPLLVMTDRNDLGGISTPMHPQVGRPAVFIYDGMPGGAA 765
             E     GS+HA EHAAIG+LPL+   DR D+GG+ST   P+ G P+VF+YDG PGGA 
Sbjct: 647 GIEATRIPGSLHAAEHAAIGLLPLVASCDRGDIGGMSTATGPE-GLPSVFVYDGYPGGAG 705

Query: 766 LSRLAFARADELFARTRDAIGDCPCETGCPSCVHSPKCGSGNRPIDKAGALFLLDRMAAG 825
            +   F RA      T +AI  C C +GCPSCV SPKCG+GN P+DKAGA+ +L  + A 
Sbjct: 706 FAERGFRRARTWLGATAEAIEACECPSGCPSCVQSPKCGNGNDPLDKAGAVRVLRLVLAE 765

Query: 826 TPE 828
             E
Sbjct: 766 LSE 768