Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1513 a.a., Probable ATP-dependent helicase Lhr (large helicase-related protein) from Mycobacterium tuberculosis H37Rv

 Score =  124 bits (310), Expect = 7e-32
 Identities = 164/547 (29%), Positives = 221/547 (40%), Gaps = 97/547 (17%)

Query: 137 QARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFL-------RDPDARAIYLFPLKAL 189
           QA A   I  G + +V  PT SGKT    L  L+          R    R +Y+ PLKAL
Sbjct: 31  QASAWAAIADGDNTLVIAPTGSGKTLAAFLWALDSLAGSEPMSERPAATRVLYVSPLKAL 90

Query: 190 AQD---QLAT-FNALTAHWPRDARPA----AAIYDGDTTDHFRRKIRNAPPPVLLTNPEM 241
           A D    L T    LT    R   PA      +  GDT    RR++ + PP VL+T PE 
Sbjct: 91  AVDVERNLRTPLAGLTRLAERQGLPAPQIRVGVRSGDTPPALRRQLVSQPPDVLITTPES 150

Query: 242 LHLALLPHHEQWASLFASLTHVVVDEVHTYRGV-LGAHMAQVFRRLRRVCERYGAQPSFV 300
           L L L     Q       +  V++DE+H       GAH+A    RL  +  R  AQ   +
Sbjct: 151 LFLMLTSAARQ---TLTGVQTVIIDEIHAIAATKRGAHLALSLERLDDLSSRRRAQR--I 205

Query: 301 FCSATVGNPGELAHNLTGLTPEVVTESGAPQGKRHFIFLD-PEESPAT------AAIQLL 353
             SATV  P ELA  L+G +P  +    A +     + +  P+ +  T           L
Sbjct: 206 GLSATVRPPEELARFLSGQSPTTIVAPPAAKTVELSVQVPVPDMANLTDNTIWPDVEARL 265

Query: 354 RSALKRGLRTIVYCQSRRMTELVS-------------------------------LWAAE 382
              ++    TIV+  SRR+ E ++                               + + +
Sbjct: 266 VDLIESHNSTIVFANSRRLAERLTARLNEIHAARCGIELAPDTNQQVAGGAPAHIMGSGQ 325

Query: 383 KSGPYRDRISAYRAGFLPEERRDVEARMASGQLLAVITTSALELGIDIGSLDLCILVGYP 442
             G       A+      E+R  VE  +  GQL AV+ TS+LELGID+G++DL I V  P
Sbjct: 326 TFGAPPVLARAHHGSISKEQRAVVEEDLKRGQLKAVVATSSLELGIDMGAVDLVIQVQAP 385

Query: 443 GTVMSTLQRGGRVGRARQESAVVLVAGEDALDQYFMRHPEDFFA---------RGAEHAV 493
            +V S LQR GR G            GE +    F +H  D             G    +
Sbjct: 386 PSVASGLQRIGRAGHQ---------VGEISRGVLFPKHRTDLLGCAVSVQRMLAGEIETM 436

Query: 494 LNPDNPV-ILARHLECAAAEIPLSAADPWLASPGASEAVQRLEREGLLLRSADGSTL-LA 551
             P NP+ ILA+H   AAA  PL  AD W       + V+R      L RS   +TL L 
Sbjct: 437 RVPANPLDILAQHTVAAAALEPLD-ADAWF------DTVRRAAPFATLPRSLFEATLDLL 489

Query: 552 SRKRPQ--------RHVDLRGSGSTYTIEDGEGHIIGSVDGHRALRETHPGAVYLHRGRT 603
           S K P         R V  R +G T T   G   +  +V    A+ +    AVYL   R 
Sbjct: 490 SGKYPSTEFAELRPRLVYDRDTG-TLTARPGAQRL--AVTSGGAIPDRGLFAVYLATERP 546

Query: 604 WVVQQLD 610
             V +LD
Sbjct: 547 SRVGELD 553