Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1516 a.a., ATP-dependent helicase from Pantoea sp. MT58

 Score =  103 bits (256), Expect = 1e-25
 Identities = 125/454 (27%), Positives = 180/454 (39%), Gaps = 61/454 (13%)

Query: 137 QARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFL----------RDPDARAIYLFPL 186
           Q  A   I  G   +V  PT SGKT    L  ++             R+   R +Y+ P+
Sbjct: 39  QQAAWQAIARGEHALVIAPTGSGKTLAAFLTAIDTLFQVRTSQPAPTRETTTRILYISPV 98

Query: 187 KALAQDQLATFNALTA--HWPRDARPAAAIY------DGDTTDHFRRKIRNAPPPVLLTN 238
           KALA D     N   A  +  R A     I        GDT    R ++   PP +L+T 
Sbjct: 99  KALAADVQRNLNLPLAGVYAERQALNEPEITLNIGMRSGDTPSTERARLLRRPPDILITT 158

Query: 239 PEMLHLALLPHHEQWASLFASLTHVVVDEVHTYRGVL-GAHMAQVFRRLRRVCERYGAQP 297
           PE L L L     +  +    +T V+VDEVH   G   G+ +A    RL  +  +   + 
Sbjct: 159 PESLFLMLT---SKARTTLKGVTTVIVDEVHAVAGSKRGSQLALSLERLDALLPKPAQR- 214

Query: 298 SFVFCSATVGNPGELAHNLTGLTPEVVTESGAPQGKRHFIFLDPEESPATAAIQLLRSAL 357
             +  SATV     +A  L G  P  V    A +     I +  E+    A+   L   +
Sbjct: 215 --IGLSATVRPVERVAAFLGGCQPVQVVNPAANRTLHLTIEVPVEDMTDIASADNLTDDV 272

Query: 358 KRGL-------------------RTIVYCQSRRMTE----------LVSLWAAEKSGPYR 388
                                   T+V+  SR + E          L     AE     R
Sbjct: 273 TSASGSIWPHIEARILQQVMAHRATLVFVNSRGLAEKLTARLNARYLAQQATAEVQDAER 332

Query: 389 ----DRISAYRAGFLPEERR-DVEARMASGQLLAVITTSALELGIDIGSLDLCILVGYPG 443
               D I+    G + +E+R ++EA +  G+L  V+ TS+LELGID+G +DL + VG P 
Sbjct: 333 TNDDDLIARSHHGSVSKEQRGEIEAALKQGRLRCVVATSSLELGIDMGPVDLVVQVGAPL 392

Query: 444 TVMSTLQRGGRVGRARQESAVVLVAGEDALDQYFMRHPEDFFARGAEHAVLNPDNPV-IL 502
           +V S LQR GR G      +  ++      D        +    G   A+  P NP+ IL
Sbjct: 393 SVASALQRVGRAGHQVGGVSTGILFPRTRRDLLDSAVIIESMRAGQLDALAPPRNPLDIL 452

Query: 503 ARHLECAAAEIPLSAADPWLASPGASEAVQRLER 536
           A+    A A  PL  AD W A    ++  + L R
Sbjct: 453 AQQTLAAVAMDPLQ-ADEWYAQVCRADPFRTLSR 485