Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1484 a.a., DNA repair helicase Lhr (from data) from Dyella japonica UNC79MFTsu3.2

 Score =  108 bits (271), Expect = 2e-27
 Identities = 109/401 (27%), Positives = 159/401 (39%), Gaps = 86/401 (21%)

Query: 137 QARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFLRD--------PDARAI-YLFPLK 187
           Q  A   IR GR  +VA PT SGKT    L  ++  +R+        PDA  + Y+ PLK
Sbjct: 25  QLAAWPSIREGRHTLVAAPTGSGKTLTAFLAAIDGLVREGLAHGGALPDATTVVYVSPLK 84

Query: 188 ALAQDQLATFNA--------LTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLTNP 239
           AL+ D      A        L A    D     A+  GDT    R  +R  PP +L+T P
Sbjct: 85  ALSNDIHINLEAPLEGIRAELAALGLPDVAIRTAVRTGDTPQAERTLMRRQPPHILVTTP 144

Query: 240 EMLHLALLPHHEQWASLFASLTHVVVDEVHTYRGV-LGAHMAQVFRRLRRVCERYGAQPS 298
           E L++ L         +      V+VDE+H       G+H+A    RL  +C+R   +  
Sbjct: 145 ESLYILL--GSASGREMLGGTRTVIVDEIHAMASTKRGSHLALSLERLEALCQRPLLR-- 200

Query: 299 FVFCSATVGNPGELAHNLTG----------LTP----------------EVVTESGAPQG 332
            +  SAT     E+A  L G           TP                E  TE  A  G
Sbjct: 201 -IGLSATQKPIEEVAKFLVGEGNDATLAAAFTPSPQRGEGWGEGDRRSVEAGTEKRAMLG 259

Query: 333 KRHFIFLDPEESPATAAIQL-------------------LRSALKRGLRTIVY------- 366
           +       P  +P      +                   L + +      +VY       
Sbjct: 260 RSAIASPGPSSAPPAHTCNIVDVGHTRERDLAIEVTPVPLEAVMSNDAWELVYNRLAELA 319

Query: 367 ---------CQSRRMTELVSLWAAEKSGPYRDRISAYRAGFLPEERRDVEARMASGQLLA 417
                      +RRM E V+   +E+ G  +  ++A+      E+R D E R+  G+L  
Sbjct: 320 QAHRTTLVFVNTRRMAERVARHLSERMG--KQAVAAHHGSLAREQRLDAEQRLKRGELKV 377

Query: 418 VITTSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVGRA 458
           ++ T++LELGIDIG +DL   +  P ++ + LQR GR G A
Sbjct: 378 LVATASLELGIDIGDVDLVCQLSSPRSIAAFLQRAGRSGHA 418