Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 802 a.a., DEAD/DEAH box helicase from Dyella japonica UNC79MFTsu3.2

 Score =  424 bits (1091), Expect = e-122
 Identities = 284/792 (35%), Positives = 395/792 (49%), Gaps = 76/792 (9%)

Query: 64  RPPSPL---QDNEANASDLVAEYIAALLASRTFGRQVRHHRVIPQREAQTAPQHRPWTRA 120
           R P P     +++     L    +A  L  R +G +V  H V+  R+ +  P        
Sbjct: 2   RAPLPAIIADEDDGRLLQLSGAELAGRLVQR-YGERVTGHFVMEGRDGRYVPLPDDLPAP 60

Query: 121 VQDILTRQGIADLYSHQARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFLRDPDARA 180
           V   L  +G+A LY HQ +A      G  +VVATPTASGK+  + LPVL   +     +A
Sbjct: 61  VAAALRTRGVARLYEHQGQAWAATARGEHIVVATPTASGKSLCFTLPVLTSVMT-AGKKA 119

Query: 181 IYLFPLKALAQDQLATFNALTAHWPRDARPAAAIYDGDTTDHFRRKIRNAPPPVLLTNPE 240
           +YLFP KALAQDQ+A    L A      R  A  +DGDT    R+ IR     V+++NP+
Sbjct: 120 LYLFPTKALAQDQVAELLELNAAGELGVR--AFTFDGDTPGDARQAIR-LHGDVVVSNPD 176

Query: 241 MLHLALLPHHEQWASLFASLTHVVVDEVHTYRGVLGAHMAQVFRRLRRVCERYGAQPSFV 300
           MLH A+LPHH +WA  F +L +VV+DEVHTYRGV G+H+A V RRLRRVC  YG  P F+
Sbjct: 177 MLHQAILPHHTKWAQFFENLRYVVIDEVHTYRGVFGSHVANVLRRLRRVCAFYGVTPQFI 236

Query: 301 FCSATVGNPGELAHNLTGLTPEVVTESGAPQGKRHFIFLDP---------EESPATAAIQ 351
            CSAT+GNP E A  L       + ESGAP G +H +  +P           S  +   +
Sbjct: 237 LCSATIGNPAEHARALIEQPVTPILESGAPTGPKHVLLWNPPVVNADLGLRASARSQTNR 296

Query: 352 LLRSALKRGLRTIVYCQSRRMTELVSLWAAE---KSGPYRDRISAYRAGFLPEERRDVEA 408
           + R+A++ GL+T+V+ QSR M E+++ +  +        R RI AYR G+LP ERR  E 
Sbjct: 297 IARTAIRAGLKTLVFAQSRLMVEVLTKYLKDVFDHDPRKRPRIRAYRGGYLPTERRQAER 356

Query: 409 RMASGQLLAVITTSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVGRARQESAVVLVA 468
            M +GQ+  +++TSALELG+DIG+LD+ IL GYPG+V +T QR GR GR +Q S  +LVA
Sbjct: 357 DMRAGQVDGIVSTSALELGVDIGALDVTILNGYPGSVAATWQRFGRAGRRQQPSLGILVA 416

Query: 469 GEDALDQYFMRHPEDFFARGAEHAVLNPDNPVILARHLECAAAEIPLSAAD--------P 520
             + LDQY +RHPE F     EHA +  D P+IL  H+ CAA E+P  A D        P
Sbjct: 417 SSEPLDQYLVRHPEYFQDASPEHARIAQDQPLILLDHIRCAAFELPFRAGDAFGGQLVEP 476

Query: 521 WLASPGASEAVQRLEREGLLLRSADGSTLLASRKRPQRHVDLRG-SGSTYTIED---GEG 576
           WL         + L  EG+L R  +    +A    P   V LR  +   + + D   G  
Sbjct: 477 WL---------EVLAEEGVLHREGERFEWIAD-SYPANAVSLRSVAEGNFVVVDRTGGRQ 526

Query: 577 HIIGSVDGHRALRETHPGAVYLHRGRTWVVQQLDPGARKVMASPARVGWYTRVRGNKQTE 636
            II  VD   A    + GA+++ +   + V++LD   RK   +     +YT      + +
Sbjct: 527 AIIAEVDYSAAPLTLYEGAIHMVQSVPYQVERLDWTGRKAYVTRTEADYYTDAIDYTKLK 586

Query: 637 ILDVQDRREAWGTRVFFGRLRVTETVTGYEKRSASGGRLLGVTPLDLPPTVFETEGLWFE 696
           +LD  D   +       G + V   V GY+K        +G   ++LP +   T  +W+ 
Sbjct: 587 VLDGFDVSVSGRGECHHGEVHVVRRVAGYKKIRYYTHENIGYGNVNLPDSELHTTAVWWA 646

Query: 697 IP----DAAREATERELLHFMGSIHALEHAAIGILPLLVMTDRNDL---------GGIST 743
           +     D A E  +  L  F+ +  AL   A     + VM +  DL            +T
Sbjct: 647 LAQRTLDEAFERRQDALDGFLAAATALHTVA----TVAVMAEGRDLQKAVGSGDGAWFAT 702

Query: 744 PMHPQVGR-----------------PAVFIYDGMPGGAALSRLAFARADELFARTRDAIG 786
           P      R                 P +++YD  PGG  LS   F R  EL  R R  IG
Sbjct: 703 PDSSGHARVRTGWGDEGVDPHAPFIPTLYLYDAFPGGVGLSAPLFDRRAELVDRARQLIG 762

Query: 787 DCPCETGCPSCV 798
            C C  GCP+CV
Sbjct: 763 QCDCRLGCPACV 774