Pairwise Alignments

Query, 1121 a.a., ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1504 a.a., ATP-dependent DNA helicase from Burkholderia phytofirmans PsJN

 Score =  115 bits (288), Expect = 3e-29
 Identities = 103/356 (28%), Positives = 156/356 (43%), Gaps = 46/356 (12%)

Query: 137 QARATDIIRAGRDVVVATPTASGKTFIYNLPVLEQFLRD--------PD-ARAIYLFPLK 187
           QA A   IR GR  +VA PT SGKT    L  L+  ++         PD    +Y+ PLK
Sbjct: 72  QAAAWPQIRRGRSTLVAAPTGSGKTLTAFLSALDDLVQQGLTNGGALPDETLVVYVSPLK 131

Query: 188 ALAQD----QLATFNALTAHWPRDARP----AAAIYDGDTTDHFRRKIRNAPPPVLLTNP 239
           AL+ D           + A       P      A+  GDTT   R  ++   P +L+T P
Sbjct: 132 ALSNDIRLNLQIPLQGIAAELDARGLPPLDIRTAVRTGDTTQRERNALKKRAPHILVTTP 191

Query: 240 EMLHLALLPHHEQWASLFASLTHVVVDEVHTYR-GVLGAHMAQVFRRLRRVCERYGAQPS 298
           E L++ L    +    + +++  V+VDE+H    G  G+H+A    RL  +C+R   +  
Sbjct: 192 ESLYVLL--GSDSGRRMLSTVRTVIVDEIHALAGGKRGSHLALSLERLDALCQR---RLP 246

Query: 299 FVFCSATVGNPGELAHNLTGLTPEVVTESGAPQG---------KRHFIFLDPEESPATAA 349
            +  SAT      +A  L G       +SG P           +   + L+    P  A 
Sbjct: 247 RIGLSATQKPVSAVARFLVG---GGSIDSGIPADCAIVDVGHIRERDLALEIPPVPLEAV 303

Query: 350 I---------QLLRSALKRGLRTIVYCQSRRMTELVSLWAAEKSGPYRDRISAYRAGFLP 400
           +           L   +     T+++  +RRM E  +    E+ G  +D ++A+      
Sbjct: 304 MPNEAWERVYDRLAELVAMHRTTLIFVNTRRMAERAARHLTERLG--KDAVAAHHGSLAK 361

Query: 401 EERRDVEARMASGQLLAVITTSALELGIDIGSLDLCILVGYPGTVMSTLQRGGRVG 456
           E R D E R+  G+L  +I T++LELGIDIG +DL   +G P  +   LQR GR G
Sbjct: 362 EHRFDAEQRLKRGELRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSG 417