Pairwise Alignments

Query, 439 a.a., minor capsid protein C, degenerate (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 329 a.a., peptidase S49 from Pseudomonas fluorescens FW300-N2C3

 Score = 64.3 bits (155), Expect = 5e-15
 Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 10/197 (5%)

Query: 53  AATFGVSGGEERPYELCDGVAVIPVMGMLTPRRSWSWGYGYTTGMLDQIRPAIAAALADR 112
           A  F    G++ P       AVI + GM+  + + S          D I  ++ AA  D 
Sbjct: 58  ALIFQAVDGKKSPGGGSAYTAVIDIEGMIADKEAAS---------ADNIVGSLRAAFEDS 108

Query: 113 GVRAILLDVASPGGTVAGMKELADYIGAERAKGTK-PMAAYANGLMASAAYMIGSATGRV 171
            V+ ++L + SPGG+      + D I   RA      + A  + L AS AY I SA  ++
Sbjct: 109 KVKGVVLRINSPGGSPVQAGYVYDEIVRLRAAHPDIKVYAVISDLGASGAYYIASAADQI 168

Query: 172 LAPATATVGSIGVISVYEDWSKWNEKAGLSYAYLTAGQWKAVGNPDTPLADNERAYLQER 231
            A   + VGSIGV +    + +  +K G+     TAG+ K+  +P  P    E A+ Q  
Sbjct: 169 YADKASLVGSIGVTAAGYGFVQTLDKLGVERRVYTAGEHKSFLDPFQPQKPEETAFWQGV 228

Query: 232 LTALYRHFTDGVSASMG 248
           L   ++ F   V    G
Sbjct: 229 LDTTHKQFIASVKKGRG 245