Pairwise Alignments

Query, 439 a.a., minor capsid protein C, degenerate (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 327 a.a., S49 family peptidase from Pseudomonas fluorescens SBW25-INTG

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 66/250 (26%), Positives = 105/250 (42%), Gaps = 17/250 (6%)

Query: 73  AVIPVMGMLTPRRSWSWGYGYTTGMLDQIRPAIAAALADRGVRAILLDVASPGGTVAGMK 132
           A+I V G++  + S S          D I  ++ AA  D  V+ ++L + SPGG+     
Sbjct: 76  ALIEVRGVIADKESAS---------ADNIVSSLRAAFEDPKVKGVILRINSPGGSPVQSG 126

Query: 133 ELADYIGAERAKGTKP---MAAYANGLMASAAYMIGSATGRVLAPATATVGSIGVISVYE 189
            + D I   R +G  P   + A  + L AS AY I SA  ++ A   + VGSIGV +   
Sbjct: 127 YVYDEI--RRLRGLHPDIKLYAVISDLGASGAYYIASAADQIYADKASLVGSIGVTAAGY 184

Query: 190 DWSKWNEKAGLSYAYLTAGQWKAVGNPDTPLADNERAYLQERLTALYRHFTDGVSASMG- 248
            +    EK G+     T+G+ K+  +P  P   +E  + Q  L   +R F   V    G 
Sbjct: 185 GFVGTMEKLGVERRTYTSGEHKSFLDPFQPQKADETQFWQGVLDTTHRQFIASVKQGRGD 244

Query: 249 -LDAANLTTWADGKVFVASEA-PQGLVTAIVADREAAIATLAKEMTMDRANLASQHPELL 306
            L   +      G V+   +A P GL+  + +    A   + ++  +D     S      
Sbjct: 245 RLKDKDHPELFSGLVWSGEQALPLGLIDGLGSASSVARDVIGEKELVDFTVEESPFDRFS 304

Query: 307 ASIEREAAEK 316
             +    AEK
Sbjct: 305 KKLGSSVAEK 314