Pairwise Alignments

Query, 306 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 306 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  246 bits (628), Expect = 5e-70
 Identities = 130/293 (44%), Positives = 190/293 (64%), Gaps = 11/293 (3%)

Query: 14  LYSFLRDPVAVGSFALLFILAVSAILAPLIAPHSPYDGATLDIMNAELPP-AWKPEGTAD 72
           L  F   P AV    +L I+ + A LAP I   +PYD   L++M+A +PP +   +    
Sbjct: 24  LTEFFSSPTAVTGLVVLLIIVLVAALAPWIVVQNPYDLMQLNVMDARMPPGSLNGDSGYT 83

Query: 73  FLLGTDNQGRDILSAMLYGMRVSLVIGLGAVALQSVIGIFVGLVSGYGSKRIDSILMRVA 132
           + LGTD QGRD++SA++YG+R+SL +G+G+  + +V+G  +GLVS Y    +D++LMR+ 
Sbjct: 84  YWLGTDGQGRDLVSAIIYGLRISLWVGIGSALIAAVLGTLLGLVSAYVGGWLDALLMRLV 143

Query: 133 DVQLSFSSYMVAIFFGAILQMVVGVGRYEEVAVPFLIFVIGLSEWPQIARTVRASVLAEK 192
           D+ LSF   ++A+   A L    GVG         ++  + L EW   ART R   L E 
Sbjct: 144 DLLLSFPVILMALMILAWLGK--GVGN--------VMLTLILLEWAYYARTARGQALTES 193

Query: 193 KKEYVEAARVIGLPARRIMLRHILPNTLTPVLVISTVQVANAVMSEAALSFLGLGMPVTQ 252
           ++EYV+AAR  G+   RI++ HILPN L P++VI  +Q+A A+  EA LSFLGLG+PVT+
Sbjct: 194 RREYVDAARGQGVGPLRIVIGHILPNCLPPLIVIGALQIARAITLEATLSFLGLGVPVTE 253

Query: 253 PSLGSLIKSGFQYFFSGSWWITLFPGIMLILLVLSINLLGDWLRDFLNPKLYK 305
           PSLG LI +GFQY  S  +WI+LFPG+ L++ +++INL+GD LRD LNP+L +
Sbjct: 254 PSLGLLIANGFQYMLSNEYWISLFPGLALLITIVAINLVGDRLRDVLNPRLQR 306