Pairwise Alignments

Query, 306 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 291 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  224 bits (570), Expect = 2e-63
 Identities = 117/282 (41%), Positives = 179/282 (63%), Gaps = 10/282 (3%)

Query: 21  PVAVGSFALLFILAVSAILAPLIAPHSPYDGATLDIMNAELPPAWKPEGTADFLLGTDNQ 80
           PV   S  LL    + AI APLIAP +PYD   +    A  PP  +  G   +LLGTD  
Sbjct: 16  PVLTASKLLLASYILVAIAAPLIAPQNPYDPLQIYGWEASSPPGTRGSGGYLYLLGTDGL 75

Query: 81  GRDILSAMLYGMRVSLVIGLGAVALQSVIGIFVGLVSGYGSKRIDSILMRVADVQLSFSS 140
           GRDI+S +LYG+R+SLV+ + + AL ++IG+  G+ + Y  K +D  +MR+ D+QLS  +
Sbjct: 76  GRDIVSTILYGLRISLVVSIVSSALAALIGLTAGVSAAYFGKWVDIAIMRLVDLQLSLPT 135

Query: 141 YMVAIFFGAILQMVVGVGRYEEVAVPFLIFVIGLSEWPQIARTVRASVLAEKKKEYVEAA 200
            ++A+   AI+ +  G+ R        +I  + +++W   AR  R   L+E  K Y++AA
Sbjct: 136 ILIALI--AIVTLGPGIDR--------IILALIIAQWATYARIARGVALSEANKPYMDAA 185

Query: 201 RVIGLPARRIMLRHILPNTLTPVLVISTVQVANAVMSEAALSFLGLGMPVTQPSLGSLIK 260
           R++ LP  RI+ RH+LPN++ P + +  ++V +AV  EA LSFLGLG+P+ +PSLGS + 
Sbjct: 186 RLMRLPTSRIIFRHLLPNSIAPAVTLIPIEVGHAVALEATLSFLGLGVPIDKPSLGSAVA 245

Query: 261 SGFQYFFSGSWWITLFPGIMLILLVLSINLLGDWLRDFLNPK 302
           +GFQY  +G +WI+LFPG+ L  L+ SINL+G+ +R  L+P+
Sbjct: 246 NGFQYLLTGQYWISLFPGLALFGLIASINLVGEDVRRSLDPR 287