Pairwise Alignments

Query, 306 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 325 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  201 bits (510), Expect = 2e-56
 Identities = 110/291 (37%), Positives = 173/291 (59%), Gaps = 14/291 (4%)

Query: 13  FLYSFLRDPVAVGSFALLFILAVSAILAPLIAPHSPYDGATLDIMNAELPPAWKPEGTAD 72
           F + F  +  AV     + ++ + A+ AP +APH PY+   +++  A++PPAW   G   
Sbjct: 47  FWHYFSENKGAVAGLIFIVVIVIVALFAPQVAPHHPYE---MNVPMAKMPPAWLEGGQWS 103

Query: 73  FLLGTDNQGRDILSAMLYGMRVSLVIGLGAVALQSVIGIFVGLVSGYGSKRIDSILMRVA 132
           +LLGTD  GRDILS +++G R+SL++G   V L  V G+ +GL++G+    +D ++MR+ 
Sbjct: 104 YLLGTDALGRDILSRIIFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIMRLM 163

Query: 133 DVQLSFSSYMVAIFFGAILQMVVGVGRYEEVAVPFLIFVIGLSEWPQIARTVRASVLAEK 192
           D+ LS  S ++AI   AIL    G G    +A       I +   P   R  RA+V+ E 
Sbjct: 164 DIILSVPSLLLAIAIVAIL----GPGLENAMA------AIAVVVLPHYTRLTRAAVMTEA 213

Query: 193 KKEYVEAARVIGLPARRIMLRHILPNTLTPVLVISTVQVANAVMSEAALSFLGLGMPVTQ 252
            K+YV A+RV G    R+M++ ILPNTL P++V +T+  + A++  AAL FLGLG    +
Sbjct: 214 TKDYVTASRVAGASKGRLMVKTILPNTLAPLIVQATLGFSTAILDAAALGFLGLGARPPR 273

Query: 253 PSLGSLIKSGFQYFFSGSWWITLFPGIMLILLVLSINLLGDWLRDFLNPKL 303
           P  G+++    ++  S  WWI  FPG+ ++  VL+ NL+GD LRD L+P++
Sbjct: 274 PEWGTMLSEAREFVLS-HWWIVTFPGLAILFTVLAFNLMGDGLRDALDPRM 323