Pairwise Alignments

Query, 306 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 328 a.a., ABC-type dipeptide/oligopeptide/nickel transport system, permease component from Dechlorosoma suillum PS

 Score =  231 bits (588), Expect = 2e-65
 Identities = 122/294 (41%), Positives = 180/294 (61%), Gaps = 10/294 (3%)

Query: 9   RKSYFLYSFLRDPVAVGSFALLFILAVSAILAPLIAPHSPYDGATLDIMNAELPPAWKPE 68
           R S FL  F  +P    +  LL +  ++A   P +AP +PYD A LDI++A LPP     
Sbjct: 41  RSSTFLARFAANPAGKLALLLLALTLLTAFAGPFLAPQNPYDPAALDILDARLPPGSAAA 100

Query: 69  GTADFLLGTDNQGRDILSAMLYGMRVSLVIGLGAVALQSVIGIFVGLVSGYGSKRIDSIL 128
               +LLG+D QGRD+LSAM+YG+R+SL++      L  ++G  +GL +GY   R + ++
Sbjct: 101 AGGTYLLGSDEQGRDLLSAMVYGLRLSLLVAGAGTGLACLLGAALGLTAGYFGGRWERLV 160

Query: 129 MRVADVQLSFSSYMVAIFFGAILQMVVGVGRYEEVAVPFLIFVIGLSEWPQIARTVRASV 188
           + +AD+QLSF + ++A+     L  + G G      +P +   +  S+W   AR+ R + 
Sbjct: 161 LALADLQLSFPALLIAL----ALLALSGPG------LPKVALALAASQWAYFARSARVAA 210

Query: 189 LAEKKKEYVEAARVIGLPARRIMLRHILPNTLTPVLVISTVQVANAVMSEAALSFLGLGM 248
           L E  K+Y+ AAR+ GL   R++ RH+LPN L P+LVI  +Q+A A+  EA LSFLGLG 
Sbjct: 211 LVESGKDYIAAARLQGLSHARLLWRHLLPNCLPPLLVILPLQLAAAISLEATLSFLGLGA 270

Query: 249 PVTQPSLGSLIKSGFQYFFSGSWWITLFPGIMLILLVLSINLLGDWLRDFLNPK 302
           P T+PSLG LI +GF Y  SG +WI+L+PG++L L V +I L  D L   L+P+
Sbjct: 271 PATEPSLGRLIANGFAYLLSGQYWISLYPGLLLTLAVTAITLAADRLAAVLDPR 324