Pairwise Alignments

Query, 306 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 306 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  505 bits (1300), Expect = e-148
 Identities = 251/306 (82%), Positives = 281/306 (91%)

Query: 1   MVALIRRFRKSYFLYSFLRDPVAVGSFALLFILAVSAILAPLIAPHSPYDGATLDIMNAE 60
           M  L++RFR+SYFLYSFLRDPVAV SFAL  +LA+SA+LAP+IAPH+P+DGA +DIM+AE
Sbjct: 1   MAGLLKRFRQSYFLYSFLRDPVAVTSFALFVVLAMSALLAPVIAPHNPFDGANIDIMDAE 60

Query: 61  LPPAWKPEGTADFLLGTDNQGRDILSAMLYGMRVSLVIGLGAVALQSVIGIFVGLVSGYG 120
            PP WK  G   FLLGTDNQGRD+ SA+LYGMRVSL+IG+GAVA+Q+ IGI VGL+SGYG
Sbjct: 61  TPPLWKDGGNPAFLLGTDNQGRDLFSAILYGMRVSLLIGVGAVAMQACIGIMVGLLSGYG 120

Query: 121 SKRIDSILMRVADVQLSFSSYMVAIFFGAILQMVVGVGRYEEVAVPFLIFVIGLSEWPQI 180
           S+R+D+ILMR+ADVQLSFSSYMVAIF GAI+QM  GVGRYE+VAVPFL+ VIGL+EWPQ 
Sbjct: 121 SRRLDNILMRIADVQLSFSSYMVAIFLGAIVQMTFGVGRYEQVAVPFLVLVIGLAEWPQY 180

Query: 181 ARTVRASVLAEKKKEYVEAARVIGLPARRIMLRHILPNTLTPVLVISTVQVANAVMSEAA 240
           ARTVRASVLAEKKKEYVEAARVIGL   RIM RHILPNTLTPVLVISTVQVANA+MSEAA
Sbjct: 181 ARTVRASVLAEKKKEYVEAARVIGLRPFRIMWRHILPNTLTPVLVISTVQVANAIMSEAA 240

Query: 241 LSFLGLGMPVTQPSLGSLIKSGFQYFFSGSWWITLFPGIMLILLVLSINLLGDWLRDFLN 300
           LSFLGLGMPVT+PSLGSLIKSGFQYFFSGSWWITLFPG++LILLVLSINLLGDWLRDFLN
Sbjct: 241 LSFLGLGMPVTKPSLGSLIKSGFQYFFSGSWWITLFPGVVLILLVLSINLLGDWLRDFLN 300

Query: 301 PKLYKD 306
           PKLYKD
Sbjct: 301 PKLYKD 306