Pairwise Alignments

Query, 329 a.a., tryptophanyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 399 a.a., tryptophanyl-tRNA synthetase from Herbaspirillum seropedicae SmR1

 Score =  238 bits (607), Expect = 2e-67
 Identities = 136/308 (44%), Positives = 182/308 (59%), Gaps = 26/308 (8%)

Query: 7   RTVSGMRPTGPLHLGHYFGVLKNWVEMQHEMEAYFFVADWHALTSDFAEPSRIKEFVPEL 66
           R VSGMRPTG LHLGHY G LKNWV++Q E+   FFVADWHALT+ + +PS I+    E+
Sbjct: 5   RVVSGMRPTGALHLGHYHGALKNWVKLQSELPCLFFVADWHALTTHYDDPSVIETSTWEM 64

Query: 67  VKDWVAAGLDPEKCVIFQQSQVKEHAELHLILSMITPVSWLERNPTYKEQQQEITTKDLG 126
           V DW+AAG+DP +  +F QS+V EHAELHL+LSM TP+ WLER PTYK+QQ+++  +DL 
Sbjct: 65  VIDWLAAGVDPAQSTLFIQSRVPEHAELHLLLSMATPLGWLERVPTYKDQQEKLADRDLA 124

Query: 127 NYGFLGYPVLMASDILIYRPKWVPVGQDQLPHLELTREIGRRFNHFYGDFFPEPEARLTP 186
            YGFLGYP+L A+D+LIYR   VPVG+DQ+PH+E+ REI RRFNH YG      E  L  
Sbjct: 125 TYGFLGYPLLQAADVLIYRASQVPVGEDQVPHIEIMREIARRFNHLYGKEKGFEEKALAA 184

Query: 187 AAKCPGLDGRKMSKSYGNGIYLRDTI-----EEVAPKVRGMFTDPARLRKSDPGNPDVCN 241
             K     G K ++ Y   + LR        +E   + + M  D   L   D        
Sbjct: 185 TKKL----GSKRARLY---LELRTQFQEKGDDEALEQAKAMLDDAQNLSMIDRE-----R 232

Query: 242 LFPY-----HVLMTDAEKQAEIREGCTSAKLGCVDCKKMFLESLA--RFFEPLHERRRVL 294
           LF Y      +++T  E QA + E      L      K +  ++A     E + ++ + +
Sbjct: 233 LFGYLEGSRKLILT--EPQAMLTEASRLPGLDGAKMSKSYGNAIALREDKESVTKKVKTM 290

Query: 295 DADPERVR 302
             DP+RVR
Sbjct: 291 PTDPQRVR 298



 Score =  135 bits (340), Expect = 2e-36
 Identities = 68/146 (46%), Positives = 98/146 (67%)

Query: 179 EPEARLTPAAKCPGLDGRKMSKSYGNGIYLRDTIEEVAPKVRGMFTDPARLRKSDPGNPD 238
           EP+A LT A++ PGLDG KMSKSYGN I LR+  E V  KV+ M TDP R+R+SDPG+PD
Sbjct: 247 EPQAMLTEASRLPGLDGAKMSKSYGNAIALREDKESVTKKVKTMPTDPQRVRRSDPGDPD 306

Query: 239 VCNLFPYHVLMTDAEKQAEIREGCTSAKLGCVDCKKMFLESLARFFEPLHERRRVLDADP 298
            C ++ +H + + AE +    +GC SA +GC++CK+  ++++ +  +P+ ER +    DP
Sbjct: 307 KCPVWQFHQVYSSAEVKEWAAKGCRSAGIGCLECKQPVIDAILQEQQPMLERAQPYLDDP 366

Query: 299 ERVRAILEDGNTRARREAAATMDGVR 324
             VRAI+ DG  +AR+ A  TM  VR
Sbjct: 367 SLVRAIVADGCEKARKLAQETMRDVR 392