Pairwise Alignments

Query, 329 a.a., tryptophanyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 400 a.a., tryptophanyl-tRNA synthetase from Burkholderia phytofirmans PsJN

 Score =  233 bits (593), Expect = 8e-66
 Identities = 135/306 (44%), Positives = 185/306 (60%), Gaps = 22/306 (7%)

Query: 7   RTVSGMRPTGPLHLGHYFGVLKNWVEMQHEMEAYFFVADWHALTSDFAEPSRIKEFVPEL 66
           R  SGMRPTG LHLGHY GVLKNWV +Q E   +F V DWHALT+ +  P  I++ V ++
Sbjct: 5   RIFSGMRPTGSLHLGHYHGVLKNWVRLQSEYPCFFCVVDWHALTTHYETPEVIEKNVWDV 64

Query: 67  VKDWVAAGLDPEKCVIFQQSQVKEHAELHLILSMITPVSWLERNPTYKEQQQEITTKDLG 126
           + DW+A+G+DP +  +F QS+V EHAEL L+L M TP+ WLER PTYKEQQ+++  KDL 
Sbjct: 65  LIDWLASGIDPAQATLFIQSKVPEHAELALLLGMSTPLGWLERVPTYKEQQEKLKDKDLS 124

Query: 127 NYGFLGYPVLMASDILIYRPKWVPVGQDQLPHLELTREIGRRFNHFYGDFFPEPEARLTP 186
            YGFLGYPVLMA+DIL+YR   VPVG+DQ+PH+E+TREI RRFN+ YG   P  E + + 
Sbjct: 125 TYGFLGYPVLMAADILLYRGSLVPVGEDQVPHVEMTREIARRFNYLYGR-EPGFEEKASD 183

Query: 187 AAKCPGLDGRKMSKSYGNGIYLRDTIEEVAPKVRGMFTDPARLRKSDPGNPDVCNLFPY- 245
           AAK  G    K+     N  Y ++  +E   + R M  +   L  +D        LF Y 
Sbjct: 184 AAKKLGGKRAKLYHELRNA-YQQEGDDEALEQARAMLQESQSLSMNDRE-----RLFGYL 237

Query: 246 ----HVLMTDAEKQAEIREGCTSAKLGCVDCKKMFLE-----SLARFFEPLHERRRVLDA 296
                +++   E QA + E   ++++  +D +KM         L    E + ++ R +  
Sbjct: 238 EGSRKIIL--VEPQAMLTE---ASRMPGLDGQKMSKSYGNTIGLREDAETITKKVRTMPT 292

Query: 297 DPERVR 302
           DP RVR
Sbjct: 293 DPARVR 298



 Score =  138 bits (347), Expect = 3e-37
 Identities = 68/146 (46%), Positives = 98/146 (67%)

Query: 179 EPEARLTPAAKCPGLDGRKMSKSYGNGIYLRDTIEEVAPKVRGMFTDPARLRKSDPGNPD 238
           EP+A LT A++ PGLDG+KMSKSYGN I LR+  E +  KVR M TDPAR+R++DPG+PD
Sbjct: 247 EPQAMLTEASRMPGLDGQKMSKSYGNTIGLREDAETITKKVRTMPTDPARVRRTDPGDPD 306

Query: 239 VCNLFPYHVLMTDAEKQAEIREGCTSAKLGCVDCKKMFLESLARFFEPLHERRRVLDADP 298
            C ++  H + TD      +++GC +A +GC++CK+  +E + R  +P+ ER +    DP
Sbjct: 307 KCPVWQLHQVYTDEATHEWVQKGCRTAGIGCLECKQPVIEGILREQQPMLERAQKYMDDP 366

Query: 299 ERVRAILEDGNTRARREAAATMDGVR 324
             +RAI+ DG  +AR+ A  TM  VR
Sbjct: 367 SLLRAIVADGCDKARKFATETMRDVR 392