Pairwise Alignments

Query, 377 a.a., hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 324 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 88/328 (26%), Positives = 143/328 (43%), Gaps = 12/328 (3%)

Query: 3   KRLFVLLVLLGVASAAGWYVTRHAPGDGPE--VLHGNIDHRQVDLAFKDAERVSTVQVDE 60
           K +   L+ L   +  GW   R      PE   L G I+ +Q  ++ K   R+  V V +
Sbjct: 2   KTVKTTLMTLTAVAVVGWIGYRFYQAYQPEPVTLQGQIESQQYSISSKVPGRIDQVLVRK 61

Query: 61  GDAVAAGDVVATLETERLDLEIARSRATVRAQEAVLARLEAGSRPQEIRRAEADVAAAAA 120
           GD V  G ++ TL +  +D ++ ++ A  +A  A+    E G+R Q+I+ A+     A A
Sbjct: 62  GDQVEKGQLIFTLLSPEIDAKLEQAIAGQKAAGALAQEAENGAREQQIQAAKDQWLKAQA 121

Query: 121 DAVNARAVHARMAALLAVGGVAPQDEENARAARDVAEGRAAQARAQLALVREGPRSED-- 178
            A  A   + R+  L   G V+ Q  + A+     A+   + A     L +EG R E   
Sbjct: 122 AAELAEKTYLRVNNLYNDGVVSEQKRDEAQTQWQAAKYTESAALQMYQLAKEGAREETKQ 181

Query: 179 --IDEARAALAARRQELAVLERRRVESVLVAPTAGVVRKRLLEPGDMAAPSRPVCTIDLT 236
             +++AR A  A    +A +E    ++ + +   G V + L+  G++A    PV T+  T
Sbjct: 182 AALEKARMAAGA----VAEVEAYAADTKIQSWFDGEVSQVLMHSGELAPQGFPVVTVVDT 237

Query: 237 GVKWVRVFVPESMLATMVPGRAAEVSVDGAPGKVFAGRVAHVAASAEF-TPRNVETPELR 295
              W    V E +L     G A   +   A  K    +V HVA   +F T R+ +  +  
Sbjct: 238 QDTWAVFNVREDLLKHFTQG-AQFTAYLPALNKSIEFKVTHVAVMGDFATWRSTDATQGF 296

Query: 296 TSLVYEVRVLVDDPGGLLRLGMPATVRL 323
               +EV      P   LR+GM   V+L
Sbjct: 297 DLRTFEVEARPVTPTEGLRMGMSVVVKL 324