Pairwise Alignments

Query, 278 a.a., cation ABC transporter, permease protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 260 a.a., zinc ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  101 bits (251), Expect = 2e-26
 Identities = 65/254 (25%), Positives = 125/254 (49%), Gaps = 10/254 (3%)

Query: 11  MLHALAAGALAGVACSVAGVFAVLMRLTFIGVCLAHAAFAGGLLALAFGLPSLPAALASS 70
           +L +L AG    +     G F V  R+ + G  LAHA+  G  L     +    A L   
Sbjct: 5   LLPSLLAGLGIAIIAGPLGSFVVWRRMAYFGDTLAHASLLGLALGFLLDINLYLALLVCC 64

Query: 71  MVAALVVGPLADRGEISPDTAVGIVFSAMIGVAVLCMGLLPGPKTEALNLFWGSILTVRP 130
           +  A ++  +  +  I+ DT +GI+  + + + ++ +  L   + + ++  +G +L + P
Sbjct: 65  LGMAAILVAMQKQKLIATDTLLGIMAHSALSLGMIAVSFLDNVRIDLMSYLFGDLLAISP 124

Query: 131 RD---VWLLAAVAGVAVVGVAVF--FKEVQAVACHRSVAAAVGIPATAVFYAILLQTGVT 185
            D   +W      GV  V + V+  ++ + + + +  +A   G     +   ++L  G+ 
Sbjct: 125 SDLTFIWF-----GVVTVSLIVYLLWQPLLSTSVNEELAFVEGTNTDLMRLILMLLIGLV 179

Query: 186 VTACLPSVGGLLVYSLLVSPAAAAYQLTYSLGRMFLLAMFFGALSGVGGVLVAWYLDVPA 245
           +   +  VG L++ SLL+ PAA A +L+ +   M   A+  G LS +GG+ ++W+ D PA
Sbjct: 180 IAVGMKFVGALIMGSLLIIPAATARRLSRTPEAMAFWAIGLGVLSVIGGLALSWHFDTPA 239

Query: 246 GAAVVLFSCALFLL 259
           G +VV+ +  LF+L
Sbjct: 240 GPSVVVSAAVLFVL 253