Pairwise Alignments

Query, 278 a.a., cation ABC transporter, permease protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 286 a.a., ABC-3 transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  116 bits (291), Expect = 5e-31
 Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 7/278 (2%)

Query: 3   SSPFDHAFMLHALAAGALAGVACSVAGVFAVLMRLTFIGVCLAHAAFAGGLLALAFGLPS 62
           + PF + +M++A+   AL G  C+    F +L   + IG  L+HA   G   A   GLP 
Sbjct: 6   AQPFAYDYMINAMWVSALVGGVCAFLSCFLMLKGWSLIGDALSHAIVPGVAGAAIIGLPF 65

Query: 63  LPAALASSMVAALVVGPLADRGEISPDTAVGIVFSAMIGVAVLCMGLLPGPKTEALNLFW 122
              A  +  +AA  +  L  R  +  D  +G++F++ +G+ +  + L P        +  
Sbjct: 66  SVGAFLAGGLAAGAMLFLNRRTRLKEDAIIGLIFTSFLGLGLFMISLDPA-SVNVQTIVL 124

Query: 123 GSILTVRPRDVWLLAAVAGVAVVGVAVFFKEVQAVACHRSVAAAVGI-PAT--AVFYAIL 179
           G+IL +   D   L  ++G+++  +   +K++       S A +VG+ PA    VF+ +L
Sbjct: 125 GNILAITRGDTLQLVLISGISLAVLLAKWKDLMVAFFDESHARSVGLNPALLKGVFFTLL 184

Query: 180 LQTGVTVTACLPSVGGLLVYSLLVSPAAAAYQLTYSLGRMFLLAMFFGALSGVGGVLVAW 239
                   A L +VG  LV +++V+P A AY LT    R+ +L++  G LS + G  +++
Sbjct: 185 ---SACTVAALQTVGAFLVIAMVVTPGATAYLLTDRFPRLIVLSVGLGVLSCLIGTYLSF 241

Query: 240 YLDVPAGAAVVLFSCALFLLAAWFSPKRDRAARSASSR 277
           +LD   G  +V+    +FLLA  F+PK    A     R
Sbjct: 242 FLDGATGGVIVVLQTLVFLLAFLFAPKHGLLAARLRGR 279