Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 359 a.a., DNA polymerase IV (EC 2.7.7.7) from Xanthomonas campestris pv. campestris strain 8004

 Score =  275 bits (702), Expect = 2e-78
 Identities = 164/337 (48%), Positives = 209/337 (62%), Gaps = 4/337 (1%)

Query: 1   MHIDMDAFFASVEQLDDPSLRGRPVIVGGSSERGVVSAASYEARRYGVRSAMPTVTARRL 60
           +H+DMDAF+ASVEQ DDPSLRG+PV+V     R VV AASYEAR +G+RSAMP V A RL
Sbjct: 5   VHVDMDAFYASVEQRDDPSLRGKPVVVAWRGARSVVCAASYEARTFGIRSAMPAVRAERL 64

Query: 61  CPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLFGPVDEMAQR 120
           CP  VFV     RY  VSR V  + H  + +VE  S+DEAYLD T  +       E+AQ 
Sbjct: 65  CPDAVFVPPDFARYKAVSRQVREIFHRHTDLVEPLSLDEAYLDVTEAKTGMQLATEIAQL 124

Query: 121 LKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPGV 180
           ++ ++RE T  LT S G+AP KFLAKIASD  KPDG F++ P  V AFL  LPV RIPGV
Sbjct: 125 IRTQIREET-QLTASAGIAPNKFLAKIASDWRKPDGQFVIAPSRVDAFLLPLPVNRIPGV 183

Query: 181 GKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSES 240
           GK M   L  LG+ T  D+   P+   +  FG  G  LY RARGID RP+EP    +S S
Sbjct: 184 GKVMDGKLAALGIVTVSDLRLRPLEELQAHFGSFGQSLYRRARGIDERPVEPDQEVQSVS 243

Query: 241 AEVTLAADTADRAVLRRWLLAQAERVGGSLRRQGLAGRTITLKVKYADFRQLTRSRTLPE 300
           +E T + D A  A L   +   AE+   + RR    GRT+ LK+K ++FR LTRS T  +
Sbjct: 244 SEDTFSEDLALDA-LDPHIQRLAEKTWHATRRTERIGRTVVLKLKTSNFRILTRSYTPEQ 302

Query: 301 PVSATQTIFEEAWALLEALDL--EAKVRLVGLGVSHF 335
           P ++ Q + + A  L   ++L  E + RLVG+G+S F
Sbjct: 303 PPASLQGLVDIALGLTRRVELPPETRYRLVGVGLSGF 339