Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 430 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

 Score =  233 bits (595), Expect = 6e-66
 Identities = 152/378 (40%), Positives = 206/378 (54%), Gaps = 5/378 (1%)

Query: 2   HIDMDAFFASVEQLDDPSLRGRPVIVGGSSERGVVSAASYEARRYGVRSAMPTVTARRLC 61
           HID DAF+ASVE+ D+P L  +PVI+GG  +RGVVS A Y AR +GVRSAMP   A   C
Sbjct: 47  HIDCDAFYASVEKRDNPELADKPVIIGGG-KRGVVSTACYIARIHGVRSAMPMFKALEAC 105

Query: 62  PHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLF-GPVDEMAQR 120
           P  V +     +Y  V R V A++ + +P+V+  S+DEA+LD +G ERL   P      R
Sbjct: 106 PQAVVIKPDMEKYVRVGREVRAMMQELTPLVQPLSIDEAFLDLSGTERLHHDPPARTLAR 165

Query: 121 LKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPGV 180
              RV +  G +T SVGL+  KFLAK+ASD+ KP G  ++   + A FL   PV  I GV
Sbjct: 166 FAKRVEQEIG-ITVSVGLSYCKFLAKVASDLQKPRGFSVIGQAEAADFLKAKPVTLIWGV 224

Query: 181 GKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSES 240
           GK    +L+  G+R  G +     +   RR+G  G  LY  +RG+D R +E     KS S
Sbjct: 225 GKAFAATLERDGIRAIGQLQTMEEADLMRRYGTMGRRLYRLSRGLDERSVEIDGEAKSVS 284

Query: 241 AEVTLAADTADRAVLRRWLLAQAERVGGSLRRQGLAGRTITLKVKYADFRQLTRSRTLPE 300
           +E T   D A +  L   L   +E+V   LR+  LAG+T+ LK+K ADF+  TR+R L  
Sbjct: 285 SETTFNDDLARQEDLVAHLRGLSEQVAFRLRKSALAGQTVVLKLKTADFKTRTRNRRLES 344

Query: 301 PVSATQTIFEEAWALLEALDLEAKVRLVGLGVSHFGGERQMSLPIGGMPRRDDTRRERLD 360
           P      IF     LLE      K RL+G+GVS          P    P+   +RR   +
Sbjct: 345 PTRLADRIFRTGLQLLEKEVDGTKYRLIGIGVSDLVDPDLADPPDLVDPQA--SRRAAAE 402

Query: 361 ATLDRLRARFGAGAVMRG 378
             ++RLR +FG  +V  G
Sbjct: 403 DAINRLRDKFGKTSVETG 420