Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 387 a.a., nucleotidyltransferase/DNA polymerase involved in DNA repair from Dechlorosoma suillum PS

 Score =  213 bits (543), Expect = 6e-60
 Identities = 135/357 (37%), Positives = 189/357 (52%), Gaps = 29/357 (8%)

Query: 2   HIDMDAFFASVEQLDDPSLRGRPVIVGGSSE---------------------RGVVSAAS 40
           H+DMDAFFASVE L  P LRGRPV+VGG +                      RGV++ ++
Sbjct: 13  HLDMDAFFASVELLHYPELRGRPVVVGGRAVDRPRRQADGSLHFARLRDYVGRGVITTST 72

Query: 41  YEARRYGVRSAMPTVTARRLCPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEA 100
           YEAR  GV S M  + A +L P  + +      Y + SR   A +   +P +E   +DE 
Sbjct: 73  YEARALGVFSGMGLMKAAQLAPDAILLPANFDAYRDYSRRFKAAVAAIAPCIEDRGIDEI 132

Query: 101 YLDATGLERLFGPVDEMAQRLKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFIL 160
           Y+D + +E    P   +A+RLK  V  ATG LTCS+G+ P K L+KI SD++KPDG+ +L
Sbjct: 133 YIDLSHIEEATLP---LARRLKAAVLAATG-LTCSIGITPNKLLSKICSDLDKPDGITVL 188

Query: 161 PPEDVAAFLATLPVGRIPGVGKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKG-GLVLY 219
             E+V   +  L   +I G+G +  E L  LG+ + GD+   P     + FG+  G  L+
Sbjct: 189 GMEEVPTRIWPLVAKKINGIGPKANERLGQLGIHSIGDLAAAPPEMLVQHFGRSTGAWLH 248

Query: 220 DRARGIDPRPLEPWTPPKSESAEVTLAAD---TADRAVLRRWLLAQAERVGGSLRRQGLA 276
             A GID RPL     PKS S E T + D     DRA L         RV   L RQG  
Sbjct: 249 RAAHGIDERPLSTSREPKSISRESTFSRDLHARHDRAELSEIFTGMCLRVADDLARQGYV 308

Query: 277 GRTITLKVKYADFRQLTRSRTLPEPVSATQTIFEEAWALLEALDLEAKVRLVGLGVS 333
            RTI +K++YADF+ +TR  TL  P +    I + A   L+ + L+ ++RL+G+  S
Sbjct: 309 ARTIGIKLRYADFQSVTRDLTLAVPTADGAAIRKAAGECLKRVPLQQRLRLLGVRAS 365