Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 417 a.a., DNA-directed DNA polymerase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  251 bits (640), Expect = 3e-71
 Identities = 160/378 (42%), Positives = 212/378 (56%), Gaps = 4/378 (1%)

Query: 2   HIDMDAFFASVEQLDDPSLRGRPVIVGGSSERGVVSAASYEARRYGVRSAMPTVTARRLC 61
           H+D DAFFASVE+ D+P+L  RPVI+GG   RGVVS A Y AR  GVRSAMP   A  LC
Sbjct: 39  HMDCDAFFASVEKRDNPALADRPVIIGGG-RRGVVSTACYVARIKGVRSAMPMFKALALC 97

Query: 62  PHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLFG-PVDEMAQR 120
           P  V +  R   Y E SR + A++ + +P VE  S+DEA++D  G  RL G P   M  R
Sbjct: 98  PDAVVIKPRFEAYVEASRAIRAMMDEMTPDVEPLSLDEAFMDLGGTARLHGAPPAVMLAR 157

Query: 121 LKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPGV 180
           L  R+ +  G LT S+GL+  KFLAKIASD++KP G  ++   +   FLA  PV  I GV
Sbjct: 158 LVKRMEDELG-LTGSIGLSHNKFLAKIASDLDKPRGFAVIGKAETLDFLADKPVRMIWGV 216

Query: 181 GKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSES 240
           G     +L+  G+RT  D+ R   +    RFG  GL L+  ARG D R +   +P KS S
Sbjct: 217 GAAGQAALEAAGIRTFTDLARWEQTDLVARFGSMGLRLWHLARGEDARAVSGRSPVKSIS 276

Query: 241 AEVTLAADTADRAVLRRWLLAQAERVGGSLRRQGLAGRTITLKVKYADFRQLTRSRTLPE 300
            E T + DTAD  +L   +   AE+V G  + QGLAGR + LK+K +D   +TR   L +
Sbjct: 277 NETTFSEDTADPDLLEGHVWRMAEKVAGRAKAQGLAGRVVVLKLKKSDHGLITRRHALRD 336

Query: 301 PVSATQTIFEEAWALLEALDLEAKVRLVGLGVSHFGGERQMSLPIGGMPRRDDTRRERLD 360
                  +F EA AL  A+      RL+G+G+S    E    L  G +      RR R +
Sbjct: 337 ATQIADRVFREAMALFRAVPDGQSYRLLGVGLSDLVPEDGGDLS-GDLLDPGAVRRARAE 395

Query: 361 ATLDRLRARFGAGAVMRG 378
              D +RARFG  A+++G
Sbjct: 396 RATDAIRARFGETAIVKG 413