Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 387 a.a., DNA polymerase from Cupriavidus basilensis FW507-4G11

 Score =  206 bits (523), Expect = 1e-57
 Identities = 127/357 (35%), Positives = 190/357 (53%), Gaps = 29/357 (8%)

Query: 2   HIDMDAFFASVEQLDDPSLRGRPVIVGGSSE---------------------RGVVSAAS 40
           H+DMDAF+ASVE L  P LRG+PV++GG                        RGVV+ ++
Sbjct: 10  HLDMDAFYASVELLRYPELRGKPVVIGGGRNAVPEILPDGSRRFARLRDYAGRGVVTTST 69

Query: 41  YEARRYGVRSAMPTVTARRLCPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEA 100
           YEAR  GV SAM  + A +L P  + +      Y   SR+  A +  F+  +E   +DE 
Sbjct: 70  YEARALGVFSAMGMMKAAQLAPDAILLPTDFDSYRHYSRLFKAAVATFTSDIEDRGIDEI 129

Query: 101 YLDATGLERLFGPVDEMAQRLKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFIL 160
           Y+D + +    G   ++  R+K  VREATG L+CS+ +AP K LAKI S+++KPDG+ +L
Sbjct: 130 YIDLSDVP---GEPADIGTRIKQAVREATG-LSCSICIAPNKLLAKIGSELDKPDGLTLL 185

Query: 161 PPEDVAAFLATLPVGRIPGVGKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKG-GLVLY 219
              DV   +  LPV ++ G+G +  E L  LG+ T GD+    +   +  FG+     L 
Sbjct: 186 AASDVPLRIWPLPVRKVNGIGPKATEKLAALGIATVGDLASADLGMLQTHFGRSYAAWLA 245

Query: 220 DRARGIDPRPLEPWTPPKSESAEVTLAAD---TADRAVLRRWLLAQAERVGGSLRRQGLA 276
           + A+G D RP+   + PKS S E T   D     DR  L        +R+   LRR+G  
Sbjct: 246 EIAQGHDERPVVTSSEPKSMSRETTFERDLHPKQDRQTLSEVFTGLCQRLAEDLRRKGYV 305

Query: 277 GRTITLKVKYADFRQLTRSRTLPEPVSATQTIFEEAWALLEALDLEAKVRLVGLGVS 333
           GRTI +K++Y DF  +TR  ++P P +    +   A   ++ + L+ K+RL+G+ VS
Sbjct: 306 GRTIGVKLRYDDFHTVTRDLSMPAPTADAAQLRRAATECVKRVALDRKIRLLGVRVS 362