Pairwise Alignments

Query, 386 a.a., DNA polymerase IV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 357 a.a., DNA polymerase IV from Ralstonia sp. UNC404CL21Col

 Score =  221 bits (562), Expect = 3e-62
 Identities = 136/337 (40%), Positives = 193/337 (57%), Gaps = 12/337 (3%)

Query: 1   MHIDMDAFFASVEQLDDPSLRGRPVIVGGSSER-GVVSAASYEARRYGVRSAMPTVTARR 59
           +H D D F+A++E  DDP L G+P+ VGG  ER GVV+  +YEAR++G+ SAMP   A +
Sbjct: 5   IHCDCDCFYAAIEMRDDPRLVGKPLAVGGRPERRGVVATCNYEARKFGIHSAMPMAQAVK 64

Query: 60  LCPHGVFVSGRRHRYAEVSRMVMAVLHDFSPVVEQASVDEAYLDATGLERLFGPVDEMAQ 119
            CP  + V     +Y +V+R + A+ H ++P+VE  S+DEAYLD T    L G    +A+
Sbjct: 65  RCPDLLIVPPSMEKYRQVARQIFAIYHSYTPLVEPLSLDEAYLDVTDSPMLAGSGTRIAE 124

Query: 120 RLKGRVREATGGLTCSVGLAPVKFLAKIASDVNKPDGVFILPPEDVAAFLATLPVGRIPG 179
            ++ RVRE  G +T S G+AP KF+AKIASD NKPDG+F++ PE V AF+A LPV R+ G
Sbjct: 125 DIRRRVREEIG-ITVSAGVAPNKFIAKIASDWNKPDGLFVVRPEQVDAFVAELPVDRLFG 183

Query: 180 VGKRMLESLDLLGVRTAGDVLRHPVSFWERRFGKGGLVLYDRARGIDPRPLEPWTPPKSE 239
           VGK     L  LG  T GD+        ++ FG  G  L+D  RGID R ++P    KS 
Sbjct: 184 VGKVTAAKLRRLGAETCGDLRAWGTDRLQQHFGVFGFRLHDLCRGIDHRQVQPSQIRKSV 243

Query: 240 SAEVTLAADTADRAVLRRWLLAQAERVGGSLRRQGLAGRTI---TLKVKYADFRQLTRSR 296
           S E T A D       +R L+   E++   + R   AG  I    +K+++ADFR  T   
Sbjct: 244 SVEETYATDLRTLEDCQRELIVLVEQLAARVER-ARAGNMIHKTYVKLRFADFRGTTVEC 302

Query: 297 TLPEPVSATQTIFEEAWALLEALDLEA-KVRLVGLGV 332
             P+    +  +F +   L +  +     VRL+G+GV
Sbjct: 303 ISPQ---VSLPVFSK--LLTQGFERRGIPVRLLGVGV 334